RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 EML2O95834 649 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 SKILP12757 684 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 OAS2P29728 719 aaKnown RBP13.47□□□□□ -0.25
SS18-222ENST00000582792 PPM1FP49593 454 aaPredicted RBP13.47□□□□□ -0.25
SS18-222ENST00000582792 MAXP61244 160 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 ABHD18Q0P651 414 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 CRTC2Q53ET0 693 aaPredicted RBP13.47□□□□□ -0.25
SS18-222ENST00000582792 TDRD12Q587J7 1177 aaKnown RBP13.47□□□□□ -0.25
SS18-222ENST00000582792 SNAP47Q5SQN1 464 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 ARMC12Q5T9G4 340 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 RFLNAQ6ZTI6 216 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 MARK2Q7KZI7 788 aaKnown RBP13.47□□□□□ -0.25
SS18-222ENST00000582792 TRIM74Q86UV6 250 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 GALNT13Q8IUC8 556 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 UNC5BQ8IZJ1 945 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 BBS5Q8N3I7 341 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 TC2NQ8N9U0 490 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 FNIP1Q8TF40 1166 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 AP2M1Q96CW1 435 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 ABHD17AQ96GS6 310 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 PANX2Q96RD6 677 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 CTRCQ99895 268 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 ISCUQ9H1K1 167 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 ABCG8Q9H221 673 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 ZWILCHQ9H900 591 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 GRPEL1Q9HAV7 217 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 CD84Q9UIB8 345 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 MAN2B2Q9Y2E5 1009 aa13.47□□□□□ -0.25
SS18-222ENST00000582792 TMEM184BQ9Y519 407 aaPredicted RBP13.47□□□□□ -0.25
SS18-222ENST00000582792 SPENQ96T58 3664 aaKnown RBP13.47□□□□□ -0.25
SS18-222ENST00000582792 A0A0U1RQS6 177 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 MAFKO60675 156 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 LRCH4O75427 683 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 STK17BO94768 372 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 CTPS1P17812 591 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 FECHP22830 423 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 MC1RQ01726 317 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 HHEXQ03014 270 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 ASTE1Q2TB18 679 aaPredicted RBP13.46□□□□□ -0.25
SS18-222ENST00000582792 DEFB109BQ30KR1 87 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 LRRC66Q68CR7 880 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 ZNF765Q7L2R6 523 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 NLRP8Q86W28 1048 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 PIH1D2Q8WWB5 315 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 STARD8Q92502 1023 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 SCAMP4Q969E2 229 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 TRIM11Q96F44 468 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 COX14Q96I36 57 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 TRIM7Q9C029 511 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 TRIT1Q9H3H1 467 aaKnown RBP13.46□□□□□ -0.25
SS18-222ENST00000582792 APMAPQ9HDC9 416 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 SARS2Q9NP81 518 aaKnown RBP13.46□□□□□ -0.25
SS18-222ENST00000582792 ETNK2Q9NVF9 386 aa13.46□□□□□ -0.25
SS18-222ENST00000582792 SPTAN1Q13813 2472 aaKnown RBP13.45□□□□□ -0.26
SS18-222ENST00000582792 TMCO5BA8MYB1 307 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 GOLGA6L6A8MZA4 724 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 H3BRJ5 948 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 FZD6O60353 706 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 PYGLP06737 847 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 PDHA1P08559 390 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 MYBL1P10243 752 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 STAT5AP42229 794 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 MMP13P45452 471 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 PTSQ03393 145 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 SEPT6Q14141 434 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 DPYSL2Q16555 572 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 LACTB2Q53H82 288 aaPredicted RBP13.45□□□□□ -0.26
SS18-222ENST00000582792 MARC1Q5VT66 337 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 TMCO3Q6UWJ1 677 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 KDELC2Q7Z4H8 507 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 NDUFAF2Q8N183 169 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 FAM26EQ8N5C1 309 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 NSMCE1Q8WV22 266 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 NCSTNQ92542 709 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 AGAP2Q99490 1192 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 STN1Q9H668 368 aaKnown RBP13.45□□□□□ -0.26
SS18-222ENST00000582792 TBC1D29Q9UFV1 150 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 NENFQ9UMX5 172 aa13.45□□□□□ -0.26
SS18-222ENST00000582792 PRR19A6NJB7 356 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 POLR1CO15160 346 aaPredicted RBP13.44□□□□□ -0.26
SS18-222ENST00000582792 DNAJC6O75061 913 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 DLGAP3O95886 979 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 FTLP02792 175 aaPredicted RBP13.44□□□□□ -0.26
SS18-222ENST00000582792 ZNF30P17039 623 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 TCN2P20062 427 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 AMPD1P23109 780 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 ARL4AP40617 200 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 EPHA4P54764 986 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 CDH6P55285 790 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 KLRB1Q12918 225 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 NFATC2Q13469 925 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 MAP7Q14244 749 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 SLC18A3Q16572 532 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 ATP1A1-AS1Q5TC04 95 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 ALKBH5Q6P6C2 394 aaKnown RBP13.44□□□□□ -0.26
SS18-222ENST00000582792 IYDQ6PHW0 289 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 CHST15Q7LFX5 561 aaPredicted RBP13.44□□□□□ -0.26
SS18-222ENST00000582792 POLNQ7Z5Q5 900 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 ATPAF2Q8N5M1 289 aa13.44□□□□□ -0.26
SS18-222ENST00000582792 EXD1Q8NHP7 514 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms