RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 CSF2RBP32927 897 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 STC1P52823 247 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 ABHD18Q0P651 414 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 KIR2DS5Q14953 304 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 NCAPHQ15003 741 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 IFI16Q16666 785 aaKnown RBP17.75■□□□□ 0.43
MKS1-209ENST00000580127 COLEC12Q5KU26 742 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.75■□□□□ 0.43
MKS1-209ENST00000580127 IYDQ6PHW0 289 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 ARHGAP22Q7Z5H3 698 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 MAP7D3Q8IWC1 876 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 C9orf43Q8TAL5 461 aaPredicted RBP17.75■□□□□ 0.43
MKS1-209ENST00000580127 APOBEC4Q8WW27 367 aaKnown RBP17.75■□□□□ 0.43
MKS1-209ENST00000580127 RTP4Q96DX8 246 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 COX14Q96I36 57 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 ADGRE3Q9BY15 652 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 FAM83DQ9H4H8 585 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 PCDH18Q9HCL0 1135 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 RBM22Q9NW64 420 aaKnown RBP eCLIP17.75■□□□□ 0.43
MKS1-209ENST00000580127 PKD2L2Q9NZM6 624 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 TTLL3Q9Y4R7 772 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 FZD6O60353 706 aa17.74■□□□□ 0.43
MKS1-209ENST00000580127 SOD1P00441 154 aa17.74■□□□□ 0.43
MKS1-209ENST00000580127 CCNCP24863 283 aa17.74■□□□□ 0.43
MKS1-209ENST00000580127 CASRP41180 1078 aa17.74■□□□□ 0.43
MKS1-209ENST00000580127 ARSDP51689 593 aa17.74■□□□□ 0.43
MKS1-209ENST00000580127 NFATC2Q13469 925 aa17.74■□□□□ 0.43
MKS1-209ENST00000580127 ANKRD20A8PQ5CZ79 823 aa17.74■□□□□ 0.43
MKS1-209ENST00000580127 TRIM74Q86UV6 250 aa17.74■□□□□ 0.43
MKS1-209ENST00000580127 PHYKPLQ8IUZ5 450 aa17.74■□□□□ 0.43
MKS1-209ENST00000580127 NIPA2Q8N8Q9 360 aa17.74■□□□□ 0.43
MKS1-209ENST00000580127 FATE1Q969F0 183 aa17.74■□□□□ 0.43
MKS1-209ENST00000580127 TMEM9Q9P0T7 183 aa17.74■□□□□ 0.43
MKS1-209ENST00000580127 CHKBQ9Y259 395 aa17.74■□□□□ 0.43
MKS1-209ENST00000580127 NKX2-8O15522 239 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 SNX2O60749 519 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 CLDN7O95471 211 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 MBD3O95983 291 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 SKILP12757 684 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 TCN2P20062 427 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 MX2P20592 715 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 GARSP41250 739 aaKnown RBP17.73■□□□□ 0.43
MKS1-209ENST00000580127 MAPK9P45984 424 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 PTPRRQ15256 657 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 CRTC2Q53ET0 693 aaPredicted RBP17.73■□□□□ 0.43
MKS1-209ENST00000580127 CCDC183Q5T5S1 534 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 RFLNAQ6ZTI6 216 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 ZNF761Q86XN6 746 aaPredicted RBP17.73■□□□□ 0.43
MKS1-209ENST00000580127 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.73■□□□□ 0.43
MKS1-209ENST00000580127 ESX1Q8N693 406 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 BMPERQ8N8U9 685 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 KCTD6Q8NC69 237 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 PMEPA1Q969W9 287 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 TSGA13Q96PP4 275 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 HSD3B7Q9H2F3 369 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 PCDH9Q9HC56 1237 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 RAD18Q9NS91 495 aa17.73■□□□□ 0.43
MKS1-209ENST00000580127 UBR5O95071 2799 aaPredicted RBP17.73■□□□□ 0.43
MKS1-209ENST00000580127 C1orf232A0A0U1RR37 186 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 GPR89AB7ZAQ6 455 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 DNAJC6O75061 913 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 STK17BO94768 372 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 NTRK1P04629 796 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 ATP1A1P05023 1023 aaKnown RBP17.72■□□□□ 0.43
MKS1-209ENST00000580127 GPR89BP0CG08 455 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 F3P13726 295 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 GALNT2Q10471 571 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 UBAP2LQ14157 1087 aaKnown RBP17.72■□□□□ 0.43
MKS1-209ENST00000580127 PDK2Q15119 407 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 TDRD12Q587J7 1177 aaKnown RBP17.72■□□□□ 0.43
MKS1-209ENST00000580127 ALG1LQ6GMV1 187 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 LYSMD1Q96S90 227 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 AGAP2Q99490 1192 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 CTRCQ99895 268 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 MLPHQ9BV36 600 aaPredicted RBP17.72■□□□□ 0.43
MKS1-209ENST00000580127 SPRY4Q9C004 299 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 CPNE7Q9UBL6 633 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 TBC1D29Q9UFV1 150 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 ANAPC7Q9UJX3 599 aa17.72■□□□□ 0.43
MKS1-209ENST00000580127 TMEM184BQ9Y519 407 aaPredicted RBP17.72■□□□□ 0.43
MKS1-209ENST00000580127 GRID2O43424 1007 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 PRKAR1AP10644 381 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 ACP5P13686 325 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 SPINT3P49223 89 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 DSC2Q02487 901 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 TYRO3Q06418 890 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 CDC20Q12834 499 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 MAP7Q14244 749 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 PAFAH1B3Q15102 231 aaKnown RBP17.71■□□□□ 0.43
MKS1-209ENST00000580127 NFKBIBQ15653 356 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 SKIDA1Q1XH10 827 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 CYB5D1Q6P9G0 228 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 TRIM48Q8IWZ4 208 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 LPCAT1Q8NF37 534 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 MAML1Q92585 1016 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 ZNF830Q96NB3 372 aaPredicted RBP17.71■□□□□ 0.43
MKS1-209ENST00000580127 BPIFA3Q9BQP9 254 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 NUP85Q9BW27 656 aa17.71■□□□□ 0.43
MKS1-209ENST00000580127 TDRD1Q9BXT4 1180 aaKnown RBP17.71■□□□□ 0.43
MKS1-209ENST00000580127 CARD9Q9H257 536 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms