RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 FAM43BQ6ZT52 329 aaPredicted RBP4.6□□□□□ -1.67
NUP85-213ENST00000579838 CHSY3Q70JA7 882 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 NET1Q7Z628 596 aaPredicted RBP4.6□□□□□ -1.67
NUP85-213ENST00000579838 UBE2Q1Q7Z7E8 422 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 ADGRD2Q7Z7M1 963 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 SYVN1Q86TM6 617 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 ITIH5Q86UX2 942 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 TMEM25Q86YD3 366 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 HPS6Q86YV9 775 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 PHYKPLQ8IUZ5 450 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 SCUBE1Q8IWY4 988 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 LMNTD2Q8IXW0 634 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 CPNE9Q8IYJ1 553 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 BBS5Q8N3I7 341 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 TMEM199Q8N511 208 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 FIBCD1Q8N539 461 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 CHST14Q8NCH0 376 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 GRIN3AQ8TCU5 1115 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 CD200R1Q8TD46 325 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 ZNF483Q8TF39 744 aaPredicted RBP4.6□□□□□ -1.67
NUP85-213ENST00000579838 DDI1Q8WTU0 396 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 EEF1AKMT1Q8WVE0 214 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 STON2Q8WXE9 905 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 MRPS31Q92665 395 aaKnown RBP4.6□□□□□ -1.67
NUP85-213ENST00000579838 PEX13Q92968 403 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 CLP1Q92989 425 aaKnown RBP4.6□□□□□ -1.67
NUP85-213ENST00000579838 USP13Q92995 863 aaPredicted RBP4.6□□□□□ -1.67
NUP85-213ENST00000579838 MCUR1Q96AQ8 359 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 RSPRY1Q96DX4 576 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 CNDP1Q96KN2 507 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 RPL10LQ96L21 214 aaKnown RBP4.6□□□□□ -1.67
NUP85-213ENST00000579838 ZSWIM3Q96MP5 696 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 LRRC3BQ96PB8 259 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 NPAS2Q99743 824 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 DDX50Q9BQ39 737 aaKnown RBP4.6□□□□□ -1.67
NUP85-213ENST00000579838 TCF25Q9BQ70 676 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 C17orf80Q9BSJ5 609 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 C1orf21Q9H246 121 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 MMADHCQ9H3L0 296 aaPredicted RBP4.6□□□□□ -1.67
NUP85-213ENST00000579838 TFB2MQ9H5Q4 396 aaKnown RBP4.6□□□□□ -1.67
NUP85-213ENST00000579838 MEAF6Q9HAF1 191 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 POPDC3Q9HBV1 291 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 ZBTB26Q9HCK0 441 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.6□□□□□ -1.67
NUP85-213ENST00000579838 ABCB8Q9NUT2 735 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 DONSONQ9NYP3 566 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 NOP53Q9NZM5 478 aaKnown RBP4.6□□□□□ -1.67
NUP85-213ENST00000579838 EIF2B4Q9UI10 523 aaKnown RBP4.6□□□□□ -1.67
NUP85-213ENST00000579838 ZNF225Q9UK10 706 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 ADAMTS6Q9UKP5 1117 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 TMPRSS11EQ9UL52 423 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 PPM1HQ9ULR3 514 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 CORO1CQ9ULV4 474 aaPredicted RBP4.6□□□□□ -1.67
NUP85-213ENST00000579838 RPL26L1Q9UNX3 145 aaKnown RBP4.6□□□□□ -1.67
NUP85-213ENST00000579838 CDYLQ9Y232 598 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 FAM50BQ9Y247 325 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 BTRCQ9Y297 605 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 SSX2IPQ9Y2D8 614 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 SH3BP1Q9Y3L3 701 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 PCDHB9Q9Y5E1 797 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 COL4A2P08572 1712 aa4.6□□□□□ -1.67
NUP85-213ENST00000579838 TCF20Q9UGU0 1960 aaKnown RBP4.6□□□□□ -1.67
NUP85-213ENST00000579838 TRAV19A0A0A6YYK7 116 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 TRBV5-4A0A0C4DH59 114 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 A0A0J9YYE9 177 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 ATP6AP2A0A1C7CYW4 349 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 KRT87PA6NCN2 255 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 CAPN8A6NHC0 703 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 NCF1BA6NI72 391 aaPredicted RBP4.59□□□□□ -1.67
NUP85-213ENST00000579838 EIF4E1BA6NMX2 242 aaKnown RBP4.59□□□□□ -1.67
NUP85-213ENST00000579838 NCF1CA8MVU1 366 aaPredicted RBP4.59□□□□□ -1.67
NUP85-213ENST00000579838 GRXCR1A8MXD5 290 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 C9JVG2 144 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 F8W8V4 182 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 H3BNX3 289 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 AIM2O14862 343 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 PIP5K1BO14986 540 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 GRM6O15303 877 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 STX7O15400 261 aaKnown RBP4.59□□□□□ -1.67
NUP85-213ENST00000579838 KLK8O60259 260 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 KERAO60938 352 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 CLASP2O75122 1294 aaKnown RBP4.59□□□□□ -1.67
NUP85-213ENST00000579838 SMIM24O75264 130 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 NDUFS3O75489 264 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 ATP6AP2O75787 350 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 SUPT7LO94864 414 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 PENKP01210 267 aaPredicted RBP4.59□□□□□ -1.67
NUP85-213ENST00000579838 TRBC1P01850 177 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 RPSAP08865 295 aaKnown RBP4.59□□□□□ -1.67
NUP85-213ENST00000579838 RBP1P09455 135 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 NCF1P14598 390 aaPredicted RBP4.59□□□□□ -1.67
NUP85-213ENST00000579838 ANPEPP15144 967 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 BPIP17213 487 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 SYN1P17600 705 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 XRCC1P18887 633 aaPredicted RBP4.59□□□□□ -1.67
NUP85-213ENST00000579838 EN2P19622 333 aaPredicted RBP4.59□□□□□ -1.67
NUP85-213ENST00000579838 CTNNB1P35222 781 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 MSX2P35548 267 aaPredicted RBP4.59□□□□□ -1.67
NUP85-213ENST00000579838 PPM1AP35813 382 aa4.59□□□□□ -1.67
NUP85-213ENST00000579838 PPARGP37231 505 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms