RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 RWDD4Q6NW29 188 aaKnown RBP10.92□□□□□ -0.66
GGA3-206ENST00000578773 IYDQ6PHW0 289 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 NCCRP1Q6ZVX7 275 aaPredicted RBP10.92□□□□□ -0.66
GGA3-206ENST00000578773 ZNF765Q7L2R6 523 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 TAOK1Q7L7X3 1001 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 CXXC5Q7LFL8 322 aaKnown RBP10.92□□□□□ -0.66
GGA3-206ENST00000578773 PLXDC1Q8IUK5 500 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 C1orf131Q8NDD1 294 aaKnown RBP10.92□□□□□ -0.66
GGA3-206ENST00000578773 ZNF606Q8WXB4 792 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 KLHL6Q8WZ60 621 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 SEC14L1Q92503 715 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 NT5C3BQ969T7 300 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 SLC35C1Q96A29 364 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 NT5C1BQ96P26 610 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 MLPHQ9BV36 600 aaPredicted RBP10.92□□□□□ -0.66
GGA3-206ENST00000578773 METTL14Q9HCE5 456 aaKnown RBP10.92□□□□□ -0.66
GGA3-206ENST00000578773 TCFL5Q9UL49 500 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 G3BP2Q9UN86 482 aaKnown RBP10.92□□□□□ -0.66
GGA3-206ENST00000578773 SNX7Q9UNH6 387 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 INTS1Q8N201 2190 aaKnown RBP10.92□□□□□ -0.66
GGA3-206ENST00000578773 IGHV5-51A0A0C4DH38 117 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 TTC24A2A3L6 582 aaPredicted RBP10.91□□□□□ -0.66
GGA3-206ENST00000578773 PDE2AO00408 941 aaPredicted RBP10.91□□□□□ -0.66
GGA3-206ENST00000578773 CCL21O00585 134 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 STX10O60499 249 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 JRKO75564 520 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 C8BP07358 591 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 EPB41P11171 864 aaKnown RBP10.91□□□□□ -0.66
GGA3-206ENST00000578773 LHCGRP22888 699 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 TDGF1P3P51864 188 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 IST1P53990 364 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 GEMIN4P57678 1058 aaKnown RBP10.91□□□□□ -0.66
GGA3-206ENST00000578773 UBE2IP63279 158 aaKnown RBP10.91□□□□□ -0.66
GGA3-206ENST00000578773 CACHD1Q5VU97 1274 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 TMEM198Q66K66 360 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 FAM198BQ6UWH4 519 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 C11orf57Q6ZUT1 292 aaPredicted RBP10.91□□□□□ -0.66
GGA3-206ENST00000578773 MED25Q71SY5 747 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 SLC26A9Q7LBE3 791 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 ZNF354CQ86Y25 554 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 CEP97Q8IW35 865 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 TMEM102Q8N9M5 508 aaPredicted RBP10.91□□□□□ -0.66
GGA3-206ENST00000578773 SGSM3Q96HU1 749 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 SMIM14Q96QK8 99 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 AGAP2Q99490 1192 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 PLCB1Q9NQ66 1216 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 TMEM248Q9NWD8 314 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 PPARGC1AQ9UBK2 798 aaKnown RBP10.91□□□□□ -0.66
GGA3-206ENST00000578773 CPNE7Q9UBL6 633 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 CNOT8Q9UFF9 292 aaKnown RBP10.91□□□□□ -0.66
GGA3-206ENST00000578773 CD84Q9UIB8 345 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 MXRA5Q9NR99 2828 aa10.91□□□□□ -0.66
GGA3-206ENST00000578773 TRGV8A0A0C4DH27 118 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 CFAP69A5D8W1 941 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 LILRA5A6NI73 299 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 RAMP2O60895 175 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 ALOX12BO75342 701 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 WISP2O76076 250 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 NELFEP18615 380 aaKnown RBP10.9□□□□□ -0.66
GGA3-206ENST00000578773 SYT1P21579 422 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 RPL13P26373 211 aaKnown RBP10.9□□□□□ -0.66
GGA3-206ENST00000578773 OTX2P32243 289 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 FLT3P36888 993 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 FMO5P49326 533 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 SLC6A3Q01959 620 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 MTA1Q13330 715 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 MYBPC3Q14896 1274 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 CFAP58Q5T655 872 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 IZUMO3Q5VZ72 239 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 BRAT1Q6PJG6 821 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 Q6ZVL8 140 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 CHST15Q7LFX5 561 aaPredicted RBP10.9□□□□□ -0.66
GGA3-206ENST00000578773 PRSS42Q7Z5A4 293 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 DNAAF5Q86Y56 855 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 GALNT16Q8N428 558 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 ZADH2Q8N4Q0 377 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 HCAR2Q8TDS4 363 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 ECHDC3Q96DC8 303 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 PGAP3Q96FM1 320 aaPredicted RBP10.9□□□□□ -0.66
GGA3-206ENST00000578773 DTD2Q96FN9 168 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 GTPBP4Q9BZE4 634 aaKnown RBP10.9□□□□□ -0.66
GGA3-206ENST00000578773 MAGEH1Q9H213 219 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.9□□□□□ -0.66
GGA3-206ENST00000578773 RARRES3Q9UL19 164 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 HPCAL4Q9UM19 191 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 CNTN6Q9UQ52 1028 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 MTMR6Q9Y217 621 aa10.9□□□□□ -0.66
GGA3-206ENST00000578773 CXorf51AA0A1B0GTR3 108 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 TRIM49BA6NDI0 452 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 J3KR12 359 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 ATMINO43313 823 aaPredicted RBP10.89□□□□□ -0.67
GGA3-206ENST00000578773 UBXN7O94888 489 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 ACP5P13686 325 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 RHOQP17081 205 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 GNA15P30679 374 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 DNAJA1P31689 397 aaKnown RBP10.89□□□□□ -0.67
GGA3-206ENST00000578773 ETFBP38117 255 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 MAPKAPK2P49137 400 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 PMS1P54277 932 aaKnown RBP10.89□□□□□ -0.67
GGA3-206ENST00000578773 GPR19Q15760 415 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms