RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 SUFUQ9UMX1 484 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 NEU3Q9UQ49 428 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 TRPM6Q9BX84 2022 aa6.84□□□□□ -1.31
SMARCE1-212ENST00000577721 NYNRINQ9P2P1 1898 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 SIGLEC16A6NMB1 481 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 B4E171 279 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 F8VZ95 297 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 EEF2KO00418 725 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 FGF10O15520 208 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 MTSS1O43312 755 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 VPS4BO75351 444 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 KATNA1O75449 491 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 AGFG2O95081 481 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 FUCA1P04066 466 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 CYP1A1P04798 512 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 CALB1P05937 261 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 CEACAM5P06731 702 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 THRAP10827 490 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 CYP2A6P11509 494 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 NFKBIAP25963 317 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 ADCY8P40145 1251 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 TSPAN7P41732 249 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 MAPK9P45984 424 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 GPR1P46091 355 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 NSFP46459 744 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 RGRP47804 291 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 CSNK1DP48730 415 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 RENBPP51606 427 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 MLLT10P55197 1068 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 GPLD1P80108 840 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 MC2RQ01718 297 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 FMO1Q01740 532 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 KLRB1Q12918 225 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 NR1D2Q14995 579 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 MIIPQ5JXC2 388 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 LCE4AQ5TA78 99 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 HIST2H2BCQ6DN03 193 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 DNAJC24Q6P3W2 148 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 DCUN1D2Q6PH85 259 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 CEACAM20Q6UY09 585 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 TRIM72Q6ZMU5 477 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 MARK2Q7KZI7 788 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 C17orf82Q86X59 251 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 NAGSQ8N159 534 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 PELI3Q8N2H9 469 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 RTP4Q96DX8 246 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 COQ10AQ96MF6 247 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 PCMTD1Q96MG8 357 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 TEFMQ96QE5 360 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 NAA15Q9BXJ9 866 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 TEX101Q9BY14 249 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 VPS16Q9H269 839 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 TRIT1Q9H3H1 467 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 DHX35Q9H5Z1 703 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 PDFQ9HBH1 243 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 B4GALT6Q9UBX8 382 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 KLHL3Q9UH77 587 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 ADGRE2Q9UHX3 823 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 PILRAQ9UKJ1 303 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 VPS4AQ9UN37 437 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 TMEM98Q9Y2Y6 226 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 PLEKHM1Q9Y4G2 1056 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 TENM4Q6N022 2769 aa6.83□□□□□ -1.32
SMARCE1-212ENST00000577721 COL27A1Q8IZC6 1860 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 A0A1W2PQ67 120 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 MKRN2OSH3BPM6 223 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 POLR1CO15160 346 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 CCP110O43303 1012 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 STK17BO94768 372 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 HEXIM1O94992 359 aaKnown RBP6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 ASMTLO95671 621 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 CPP00450 1065 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 IVLP07476 585 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 TPM2P07951 284 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 KRT7P08729 469 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 CHRNB2P17787 502 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 GM2AP17900 193 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 NR1D1P20393 614 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 OAS2P29728 719 aaKnown RBP6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 VIPR1P32241 457 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 CSF2RBP32927 897 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 SOX5P35711 763 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 ETV3P41162 512 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 ZNF143P52747 638 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 POLR2FP61218 127 aaKnown RBP6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 AP1S1P61966 158 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 CDK3Q00526 305 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 FOXM1Q08050 763 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 NSUN2Q08J23 767 aaKnown RBP eCLIP6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 ABHD18Q0P651 414 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 NFATC2Q13469 925 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 SQSTM1Q13501 440 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 BECN1Q14457 450 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 RFTN1Q14699 578 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 CNGA3Q16281 694 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 ATP1A1-AS1Q5TC04 95 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 FHL5Q5TD97 284 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 DPY19L2P1Q6NXN4 242 aa6.82□□□□□ -1.32
SMARCE1-212ENST00000577721 Q6ZVL8 140 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms