RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 TRIB3Q96RU7 358 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 WDR24Q96S15 920 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 SPATA16Q9BXB7 569 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 HEMGNQ9BXL5 484 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 GPR63Q9BZJ6 419 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 ZMYND15Q9H091 742 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 ARFGAP3Q9NP61 516 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 KLHL8Q9P2G9 620 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 TRIM10Q9UDY6 481 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 ZNF711Q9Y462 761 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 PCDHGA8Q9Y5G5 932 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 OAS3Q9Y6K5 1087 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 CELSR3Q9NYQ7 3312 aa12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 ANKRD11Q6UB99 2663 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-213ENST00000573519 TRBV23OR9-2A0A075B6M9 112 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 MACROD2A1Z1Q3 448 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 RGSL1A5PLK6 1076 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 PLD2O14939 933 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 KLK10O43240 276 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 ZW10O43264 779 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 JMJD7P0C870 316 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 HGFP14210 728 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 HOXB3P14651 431 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 NFKB1P19838 968 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 VAV2P52735 878 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 OR1D5P58170 312 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 CXADRP78310 365 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 TLE3Q04726 772 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 TAZQ16635 292 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 ZNF569Q5MCW4 686 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 PHF19Q5T6S3 580 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 PID1Q7Z2X4 250 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 NAGSQ8N159 534 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 SCARF2Q96GP6 870 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 PRR11Q96HE9 360 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 RDH14Q9HBH5 336 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 MAGEE1Q9HCI5 957 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 VPS18Q9P253 973 aa12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 CNOT6Q9ULM6 557 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-213ENST00000573519 H7C0C1 242 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 MTSS1O43312 755 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 B4GAT1O43505 415 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 SNX2O60749 519 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 SLC25A14O95258 325 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 NDST3O95803 873 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 ACP5P13686 325 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 CCKBRP32239 447 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 UGT1A5P35504 534 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 ATP5OP48047 213 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 B4GALNT1Q00973 533 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 WASHC5Q12768 1159 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 EIF3IQ13347 325 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 LRP8Q14114 963 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 ZNF648Q5T619 568 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 IGF2-ASQ6U949 168 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 USP53Q70EK8 1073 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 PIM3Q86V86 326 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 SLC25A41Q8N5S1 370 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 GPR26Q8NDV2 337 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 HTR3CQ8WXA8 447 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 TADA1Q96BN2 335 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 EID2BQ96D98 161 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 SEMA6CQ9H3T2 930 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 BPIFA1Q9NP55 256 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 RAD18Q9NS91 495 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 PISDQ9UG56 409 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 FAM153AQ9UHL3 310 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 KCNK6Q9Y257 313 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 LOXL2Q9Y4K0 774 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 SPO11Q9Y5K1 396 aa12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 PCYT1BQ9Y5K3 369 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-213ENST00000573519 NBEAQ8NFP9 2946 aa12.58□□□□□ -0.39
NPLOC4-213ENST00000573519 GRID2IPA4D2P6 1211 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 EIF4E1BA6NMX2 242 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 BTNL10A8MVZ5 291 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 CDRT15L2A8MXV6 281 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 AURKAO14965 403 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 PPM1DO15297 605 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 PJA2O43164 708 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 DNAJC6O75061 913 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 CPNE6O95741 557 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 ITGA2BP08514 1039 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 ITIH1P19827 911 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 CTNNA2P26232 953 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 CD68P34810 354 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 CTNNA1P35221 906 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 WNT3AP56704 352 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 TMPRSS3P57727 454 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 NOMO1Q15155 1222 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 SLC14A2Q15849 920 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 PPP2R5EQ16537 467 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 NKAIN2Q5VXU1 208 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 BBS12Q6ZW61 710 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 TMPRSS9Q7Z410 1059 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 TMC3Q7Z5M5 1100 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 C17orf82Q86X59 251 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 ZNF761Q86XN6 746 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 ZNF567Q8N184 647 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 TRAM1L1Q8N609 369 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms