RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 CFHR1Q03591 330 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 CCDC173Q0VFZ6 552 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 ILF3Q12906 894 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMG6-212ENST00000573153 SLC30A9Q6PML9 568 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 PCSK4Q6UW60 755 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 ZNF574Q6ZN55 896 aaPredicted RBP17.18■□□□□ 0.34
SMG6-212ENST00000573153 BBS12Q6ZW61 710 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 TMC3Q7Z5M5 1100 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 LSMEM2Q8N112 164 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 ARL14Q8N4G2 192 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 LRRC57Q8N9N7 239 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 ZDHHC1Q8WTX9 485 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 TFB1MQ8WVM0 346 aaKnown RBP17.18■□□□□ 0.34
SMG6-212ENST00000573153 GFM1Q96RP9 751 aaKnown RBP17.18■□□□□ 0.34
SMG6-212ENST00000573153 BAG1Q99933 345 aaPredicted RBP17.18■□□□□ 0.34
SMG6-212ENST00000573153 GOLGA6AQ9NYA3 693 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 VPS18Q9P253 973 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 MGAQ8IWI9 3026 aa17.18■□□□□ 0.34
SMG6-212ENST00000573153 A0A0U1RQJ8 604 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 LOC285095A0A1B0GVY8 99 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 HACD1B0YJ81 288 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 PPM1DO15297 605 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 ATP1A1P05023 1023 aaKnown RBP17.17■□□□□ 0.34
SMG6-212ENST00000573153 CTNNA2P26232 953 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 CA5AP35218 305 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 PCBP4P57723 403 aaKnown RBP17.17■□□□□ 0.34
SMG6-212ENST00000573153 CDK18Q07002 472 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 XRCC4Q13426 336 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 NOMO1Q15155 1222 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 ZNF567Q8N184 647 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 ZNF248Q8NDW4 579 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 WDR36Q8NI36 951 aaKnown RBP17.17■□□□□ 0.34
SMG6-212ENST00000573153 P3H4Q92791 437 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 QKIQ96PU8 341 aaKnown RBP eCLIP17.17■□□□□ 0.34
SMG6-212ENST00000573153 VAT1Q99536 393 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 FAM83DQ9H4H8 585 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 MAGEE1Q9HCI5 957 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 SEPT10Q9P0V9 454 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 ZNF711Q9Y462 761 aa17.17■□□□□ 0.34
SMG6-212ENST00000573153 UNC13CQ8NB66 2214 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 CCDC66A2RUB6 948 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 APOC4-APOC2K7ER74 178 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 APOC2P02655 101 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 HGFP14210 728 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 NFKB1P19838 968 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 CSF2RBP32927 897 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 ETV5P41161 510 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 KHDC1Q4VXA5 237 aaKnown RBP17.16■□□□□ 0.34
SMG6-212ENST00000573153 KAZNQ674X7 775 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 MARK2Q7KZI7 788 aaKnown RBP17.16■□□□□ 0.34
SMG6-212ENST00000573153 KDELC2Q7Z4H8 507 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 TTC30BQ8N4P2 665 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 Q8N9G6 341 aaPredicted RBP17.16■□□□□ 0.34
SMG6-212ENST00000573153 ACRBPQ8NEB7 543 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 KIAA1524Q8TCG1 905 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 ALG3Q92685 438 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 HAUS1Q96CS2 278 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 MRGPRX2Q96LB1 330 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 SRPK1Q96SB4 655 aaKnown RBP17.16■□□□□ 0.34
SMG6-212ENST00000573153 CDH19Q9H159 772 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 SEMA6CQ9H3T2 930 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 SYNDIG1Q9H7V2 258 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 C10orf88Q9H8K7 445 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 UBP1Q9NZI7 540 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 SHOC2Q9UQ13 582 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 PRKAB1Q9Y478 270 aa17.16■□□□□ 0.34
SMG6-212ENST00000573153 NDST3O95803 873 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 ITGA2BP08514 1039 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 BPIP17213 487 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 CD1CP29017 333 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 UGT1A5P35504 534 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 ACTR1BP42025 376 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 MLLT3P42568 568 aaPredicted RBP17.15■□□□□ 0.34
SMG6-212ENST00000573153 CHRNA4P43681 627 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 FASLGP48023 281 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 INHBCP55103 352 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 OR1D5P58170 312 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 ACTR1AP61163 376 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 C16orf72Q14CZ0 275 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 PCSK7Q16549 785 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.15■□□□□ 0.34
SMG6-212ENST00000573153 ZNF648Q5T619 568 aaPredicted RBP17.15■□□□□ 0.34
SMG6-212ENST00000573153 CCDC50Q8IVM0 306 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 TXLNBQ8N3L3 684 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 SFRP1Q8N474 314 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 CCHCR1Q8TD31 782 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 FCRL5Q96RD9 977 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 NUDT22Q9BRQ3 303 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 ZFYVE1Q9HBF4 777 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 THSD1Q9NS62 852 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 PKD2L2Q9NZM6 624 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 ACSL6Q9UKU0 697 aa17.15■□□□□ 0.34
SMG6-212ENST00000573153 GRID2IPA4D2P6 1211 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 GAPDHSO14556 408 aaPredicted RBP17.14■□□□□ 0.33
SMG6-212ENST00000573153 PLD2O14939 933 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 RRP8O43159 456 aaKnown RBP17.14■□□□□ 0.33
SMG6-212ENST00000573153 NUAK1O60285 661 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 TNFSF15O95150 251 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 EPOP01588 193 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 ARSDP51689 593 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms