RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SAE1Q9UBE0 346 aaPredicted RBP17.97■□□□□ 0.47
CHD3-214ENST00000572579 TBC1D29Q9UFV1 150 aa17.97■□□□□ 0.47
CHD3-214ENST00000572579 A6NCN8 305 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 ZNF487B1APH4 448 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 ZIC2O95409 532 aaPredicted RBP17.96■□□□□ 0.47
CHD3-214ENST00000572579 PIRTP0C851 137 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 ARHGAP25P42331 645 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 GPR3P46089 330 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 MAPK10P53779 464 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 TBX2Q13207 712 aaPredicted RBP17.96■□□□□ 0.47
CHD3-214ENST00000572579 MAP9Q49MG5 647 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 TAF1BQ53T94 588 aaPredicted RBP17.96■□□□□ 0.47
CHD3-214ENST00000572579 MFSD7Q6UXD7 560 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 RAVER1Q8IY67 606 aaKnown RBP17.96■□□□□ 0.47
CHD3-214ENST00000572579 SFRP1Q8N474 314 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 GPR26Q8NDV2 337 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 SPATA22Q8NHS9 363 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 SLC37A2Q8TED4 501 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 CCDC74BQ96LY2 380 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 AGAP3Q96P47 875 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 CMKLR1Q99788 373 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 MLPHQ9BV36 600 aaPredicted RBP17.96■□□□□ 0.47
CHD3-214ENST00000572579 CDH19Q9H159 772 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 FAM83DQ9H4H8 585 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 ADGRG1Q9Y653 693 aa17.96■□□□□ 0.47
CHD3-214ENST00000572579 LIMK2P53671 638 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 TCEAL1Q15170 157 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 LLGL1Q15334 1064 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 TAZQ16635 292 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 LINC00303Q3SY05 128 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.95■□□□□ 0.46
CHD3-214ENST00000572579 ZFYVE27Q5T4F4 411 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 LRRC38Q5VT99 294 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 VASH2Q86V25 355 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 VSIG1Q86XK7 387 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 EXD3Q8N9H8 876 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 RNF214Q8ND24 703 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 TMEM159Q96B96 161 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 DEF6Q9H4E7 631 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 ZNHIT2Q9UHR6 403 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 LCMT1Q9UIC8 334 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 TMPRSS11EQ9UL52 423 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 TFR2Q9UP52 801 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 SHOC2Q9UQ13 582 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 KCNK6Q9Y257 313 aa17.95■□□□□ 0.46
CHD3-214ENST00000572579 BOD1L1Q8NFC6 3051 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 SCN8AQ9UQD0 1980 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 APOL1O14791 398 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 AURKAO14965 403 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 ASMTLO95671 621 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 MT-CYBP00156 380 aaPredicted RBP17.94■□□□□ 0.46
CHD3-214ENST00000572579 PLA2G2AP14555 144 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 COMTP21964 271 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 CD68P34810 354 aaPredicted RBP17.94■□□□□ 0.46
CHD3-214ENST00000572579 FASLGP48023 281 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 AP1B1Q10567 949 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 TRIM14Q14142 442 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 IYDQ6PHW0 289 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 CHST15Q7LFX5 561 aaPredicted RBP17.94■□□□□ 0.46
CHD3-214ENST00000572579 TMC3Q7Z5M5 1100 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 GALNT13Q8IUC8 556 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 OR4D9Q8NGE8 314 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 CCDC42Q96M95 316 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 GOLPH3Q9H4A6 298 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 VPS18Q9P253 973 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 PDP2Q9P2J9 529 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 ATXN10Q9UBB4 475 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 SLC23A2Q9UGH3 650 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 SPO11Q9Y5K1 396 aa17.94■□□□□ 0.46
CHD3-214ENST00000572579 RGSL1A5PLK6 1076 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 CBFA2T2O43439 604 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 KRT1P04264 644 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 PYGLP06737 847 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 TPM3P06753 285 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 THRAP10827 490 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 LIPCP11150 499 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 TNNT1P13805 278 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 PECAM1P16284 738 aaPredicted RBP17.93■□□□□ 0.46
CHD3-214ENST00000572579 ZNF8P17098 575 aaPredicted RBP17.93■□□□□ 0.46
CHD3-214ENST00000572579 CDKN2BP42772 138 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 DYNLT1P63172 113 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 WASHC5Q12768 1159 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 LRP8Q14114 963 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 PDK1Q15118 436 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 CLPPQ16740 277 aaPredicted RBP17.93■□□□□ 0.46
CHD3-214ENST00000572579 KHDC1Q4VXA5 237 aaKnown RBP17.93■□□□□ 0.46
CHD3-214ENST00000572579 NT5DC3Q86UY8 548 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 SLC25A51Q9H1U9 297 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 ZNHIT6Q9NWK9 470 aaKnown RBP17.93■□□□□ 0.46
CHD3-214ENST00000572579 OCIAD1Q9NX40 245 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 KCNK4Q9NYG8 393 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.93■□□□□ 0.46
CHD3-214ENST00000572579 SCHIP1Q9P0W5 487 aaPredicted RBP17.93■□□□□ 0.46
CHD3-214ENST00000572579 DNPEPQ9ULA0 475 aa17.93■□□□□ 0.46
CHD3-214ENST00000572579 HGSO14964 777 aaPredicted RBP17.92■□□□□ 0.46
CHD3-214ENST00000572579 NUAK1O60285 661 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 ACP5P13686 325 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 CA4P22748 312 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 PTPN3P26045 913 aa17.92■□□□□ 0.46
CHD3-214ENST00000572579 CA5AP35218 305 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms