RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 OGNP20774 298 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 MAT2AP31153 395 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 AKT2P31751 481 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 ACSL1P33121 698 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 NUDT1P36639 197 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 GPR1P46091 355 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 SPINT3P49223 89 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 TTPAP49638 278 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 EIF3BP55884 814 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 PPP2CBP62714 309 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 PPP2CAP67775 309 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 RPL6Q02878 288 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 ACVR1Q04771 509 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 CSTF1Q05048 431 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 ILF2Q12905 390 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 CBLBQ13191 982 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 NFATC2Q13469 925 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 GTF2H3Q13889 308 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 FRG1Q14331 258 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 SLC29A2Q14542 456 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 CASP8Q14790 479 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 LRRC14Q15048 493 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 PTPRRQ15256 657 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 GPR33Q49SQ1 333 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 HSP90AA5PQ58FG0 334 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 SEL1L3Q68CR1 1132 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 NEPROQ6NW34 567 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 Q6ZVL8 140 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 HDXQ7Z353 690 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 CYP2U1Q7Z449 544 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 HSD11B1LQ7Z5J1 315 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 SNX20Q7Z614 316 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 CROCCP2Q86T23 111 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 LRRC6Q86X45 466 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 IGDCC3Q8IVU1 814 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 C1orf210Q8IVY1 113 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 CNPY4Q8N129 248 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 AGGF1Q8N302 714 aaeCLIP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 CBARPQ8N350 705 aaPredicted RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 TRAM1L1Q8N609 369 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 PPM1NQ8N819 430 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 DTWD2Q8NBA8 298 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 GPR26Q8NDV2 337 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 DENND6BQ8NEG7 585 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 OR13J1Q8NGT2 312 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 OR4L1Q8NH43 312 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 RLN3Q8WXF3 142 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 FAM131CQ96AQ9 280 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 VOPP1Q96AW1 172 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 MRRFQ96E11 262 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 DCUN1D1Q96GG9 259 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 TOE1Q96GM8 510 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 CDKN2AIPNLQ96HQ2 116 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 TBATAQ96M53 351 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 COQ10AQ96MF6 247 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZNF778Q96MU6 729 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 PAFAH2Q99487 392 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 MYOCQ99972 504 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 RIOK2Q9BVS4 552 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 GPR174Q9BXC1 333 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 PCED1AQ9H1Q7 454 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 FAM83DQ9H4H8 585 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 ASB8Q9H765 288 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 WDR26Q9H7D7 661 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 LRRC4CQ9HCJ2 640 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 ITM2CQ9NQX7 267 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 IARS2Q9NSE4 1012 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 DNAAF2Q9NVR5 837 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 C2orf42Q9NWW7 574 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 IL1RAPL1Q9NZN1 696 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 DLGAP2Q9P1A6 1054 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 PSMC3IPQ9P2W1 217 aaPredicted RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 NFKBIL1Q9UBC1 381 aaPredicted RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 PLAAQ9Y263 795 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 COQ6Q9Y2Z9 468 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 CHD5Q8TDI0 1954 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 IGHV1OR15-9A0A0B4J2B8 117 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 CCDC163A0A0D9SF12 145 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 CCDC162PA2VCL2 907 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 OR51F1A6NGY5 319 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 FAM159BA6NKW6 160 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 TMEM229AB2RXF0 380 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 GOLGA8KD6RF30 607 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 POC1B-GALNT4F8VUJ3 575 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 GOLGA8TH3BQL2 631 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 K7ESF4 209 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 FPGTO14772 594 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 CD3EAPO15446 510 aaKnown RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 KRT37O76014 449 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 KRT38O76015 456 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 NUDT17P0C025 328 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 MSH3P20585 1137 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 HNRNPA2B1P22626 353 aaKnown RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 ATP5DP30049 168 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 FOXN2P32314 431 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 SLC1A2P43004 574 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 MSH2P43246 934 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 CD151P48509 253 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 SERPINB9P50453 376 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 CCR5P51681 352 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms