RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 CCDC65Q8IXS2 484 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 ZNF683Q8IZ20 524 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 DSELQ8IZU8 1212 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 PELI3Q8N2H9 469 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 CIARTQ8N365 385 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 UBR7Q8N806 425 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 SLC38A9Q8NBW4 561 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 PTCD2Q8WV60 388 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 ARHGEF2Q92974 986 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 FAM149B1Q96BN6 582 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 SDCCAG3Q96C92 435 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 SLC41A2Q96JW4 573 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 AGAP4Q96P64 663 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 NDC1Q9BTX1 674 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 DHRS4Q9BTZ2 278 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 EPS8L2Q9H6S3 715 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 UCK1Q9HA47 277 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 ATP13A1Q9HD20 1204 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 PCDH12Q9NPG4 1184 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 IL17CQ9P0M4 197 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 TFIP11Q9UBB9 837 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 TRPS1Q9UHF7 1281 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 ZNF835Q9Y2P0 537 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 MFHAS1Q9Y4C4 1052 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 ACTL7AQ9Y615 435 aa6.52□□□□□ -1.37
HERPUD1-217ENST00000569429 TSPAN11A1L157 253 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 O00370 1275 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 HTRA2O43464 458 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 KIF1CO43896 1103 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 PMPCBO75439 489 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 SCRG1O75711 98 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 RHOBTB3O94955 611 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 JCHAINP01591 159 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 CRYABP02511 175 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 RAF1P04049 648 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 UNGP13051 313 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 GM2AP17900 193 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 OR1E1P30953 314 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 OTX2P32243 289 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 RORAP35398 523 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 GGCXP38435 758 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 CXCR3P49682 368 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 PITX1P78337 314 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 AIMP2Q13155 320 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 NCF4Q15080 339 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 C1orf220Q5T0J3 134 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 ERAP2Q6P179 960 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 LCLAT1Q6UWP7 414 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 CHSY3Q70JA7 882 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 AVL9Q8NBF6 648 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 SIDT2Q8NBJ9 832 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 C3orf20Q8ND61 904 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 TAS1R2Q8TE23 839 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 TMEM174Q8WUU8 243 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 ZNF514Q96K75 400 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 MAGEB10Q96LZ2 347 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 OR2M4Q96R27 311 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 SPON2Q9BUD6 331 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 SPRTNQ9H040 489 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 CLEC4MQ9H2X3 399 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 POPDC2Q9HBU9 364 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 P4HTMQ9NXG6 502 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 COQ3Q9NZJ6 369 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 EPHA6Q9UF33 1036 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 CNOT8Q9UFF9 292 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 PADI2Q9Y2J8 665 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 ZNF407Q9C0G0 2248 aa6.51□□□□□ -1.37
HERPUD1-217ENST00000569429 KIR2DS5A0A0G2JLQ3 304 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 A0A0G2JNG1 304 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 H7C1Q1 480 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 KIR2DS3K7RE56 304 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 SOCS6O14544 535 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 PRAMEF2O60811 474 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 KLF7O75840 302 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 UBXN7O94888 489 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 ZNF202O95125 648 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 ATE1O95260 518 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 VDRP11473 427 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 SLC2A4P14672 509 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 CD44P16070 742 aaKnown RBP6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 TYRP1P17643 537 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 TEAD1P28347 426 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 RPL34P49207 117 aaKnown RBP6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 GEMIN4P57678 1058 aaKnown RBP6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 CDK3Q00526 305 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 RALGDSQ12967 914 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 LRP8Q14114 963 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 KIR2DS5Q14953 304 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 SEPT7Q16181 437 aaKnown RBP6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 PYCR3Q53H96 274 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 ATXN7L2Q5T6C5 722 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 HIST2H2BDQ6DRA6 164 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 LIPIQ6XZB0 460 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 NCCRP1Q6ZVX7 275 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 SPPL2CQ8IUH8 684 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 TMEM126BQ8IUX1 230 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 KIAA0895Q8NCT3 520 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 CCDC150Q8NCX0 1101 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 CATSPER1Q8NEC5 780 aa6.5□□□□□ -1.37
HERPUD1-217ENST00000569429 OR1N1Q8NGS0 311 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms