RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SCRN2Q96FV2 425 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 MCCC1Q96RQ3 725 aaPredicted RBP14.72□□□□□ -0.05
USB1-214ENST00000568848 WDR24Q96S15 920 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 BRD8Q9H0E9 1235 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 NUP62CLQ9H1M0 184 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 AKIRIN1Q9H9L7 192 aaPredicted RBP14.72□□□□□ -0.05
USB1-214ENST00000568848 RCOR3Q9P2K3 495 aaPredicted RBP14.72□□□□□ -0.05
USB1-214ENST00000568848 SLC30A1Q9Y6M5 507 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 PRRC2CQ9Y520 2896 aaKnown RBP14.72□□□□□ -0.05
USB1-214ENST00000568848 SHANK1Q9Y566 2161 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 A6NCN8 305 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 POLR1CO15160 346 aaPredicted RBP14.71□□□□□ -0.05
USB1-214ENST00000568848 SOCS5O75159 536 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 SEMA7AO75326 666 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 LRCH4O75427 683 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 KIAA0754O94854 1291 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 TIAF1O95411 115 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 CLDN7O95471 211 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 PPP1CAP62136 330 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 RPS18P62269 152 aaKnown RBP14.71□□□□□ -0.05
USB1-214ENST00000568848 DSC2Q02487 901 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 ABHD18Q0P651 414 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 SEPT7Q16181 437 aaKnown RBP14.71□□□□□ -0.05
USB1-214ENST00000568848 FKBP15Q5T1M5 1219 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 ARMC12Q5T9G4 340 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 CPZQ66K79 652 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 ASB18Q6ZVZ8 466 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 COX14Q96I36 57 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 BTBD6Q96KE9 485 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 TGM7Q96PF1 710 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 SYT11Q9BT88 431 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 ULBP3Q9BZM4 244 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 PLEKHB1Q9UF11 243 aaPredicted RBP14.71□□□□□ -0.05
USB1-214ENST00000568848 TLK1Q9UKI8 766 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 CHKBQ9Y259 395 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 MED13Q9UHV7 2174 aa14.71□□□□□ -0.05
USB1-214ENST00000568848 CSMD1Q96PZ7 3565 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 TMEM191CA6NGB0 347 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 PRPSAP2O60256 369 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 MMP13P45452 471 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 RENBPP51606 427 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 STC1P52823 247 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 ITKQ08881 620 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 MMRN1Q13201 1228 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 NADK2Q4G0N4 442 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 PLEKHA7Q6IQ23 1121 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 IYDQ6PHW0 289 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 CRTC3Q6UUV7 619 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 USP45Q70EL2 814 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 TEX19Q8NA77 164 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 CSPG4P5Q96PW8 444 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 TEFMQ96QE5 360 aaKnown RBP14.7□□□□□ -0.06
USB1-214ENST00000568848 FBXO8Q9NRD0 319 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 MYO1AQ9UBC5 1043 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 TTLL3Q9Y4R7 772 aa14.7□□□□□ -0.06
USB1-214ENST00000568848 HIVEP3Q5T1R4 2406 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 ZW10O43264 779 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 FZD6O60353 706 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 AGFG2O95081 481 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 CD48P09326 243 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 TEAD1P28347 426 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 HTR7P34969 479 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 CD97P48960 835 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 UBXN1Q04323 297 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 DPTQ07507 201 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 FAM69BQ5VUD6 431 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 ALS2CLQ60I27 953 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 ZNF787Q6DD87 383 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 WDR74Q6RFH5 385 aaPredicted RBP14.69□□□□□ -0.06
USB1-214ENST00000568848 CERS6Q6ZMG9 384 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 IRF2BP2Q7Z5L9 587 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 ATPAF2Q8N5M1 289 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 ENOX1Q8TC92 643 aaKnown RBP14.69□□□□□ -0.06
USB1-214ENST00000568848 PLEKHG4BQ96PX9 1271 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 OR6C1Q96RD1 312 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 OSGEPL1Q9H4B0 414 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.69□□□□□ -0.06
USB1-214ENST00000568848 CPNE7Q9UBL6 633 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 TRIM10Q9UDY6 481 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 CNOT8Q9UFF9 292 aaKnown RBP14.69□□□□□ -0.06
USB1-214ENST00000568848 SLC23A2Q9UGH3 650 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 DACH1Q9UI36 760 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 LNPEPQ9UIQ6 1025 aa14.69□□□□□ -0.06
USB1-214ENST00000568848 A0A0J9YYE9 177 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 LGALS16A8MUM7 142 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 H3BRJ5 948 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 PSMD11O00231 422 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 CAPN5O15484 640 aaPredicted RBP14.68□□□□□ -0.06
USB1-214ENST00000568848 MFSD11O43934 449 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 TRBC1P01850 177 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 SLC4A1P02730 911 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 ZNF8P17098 575 aaPredicted RBP14.68□□□□□ -0.06
USB1-214ENST00000568848 NIPAL4Q0D2K0 466 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 SEPT6Q14141 434 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 KCNAB1Q14722 419 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 CAPRIN2Q6IMN6 1127 aaKnown RBP14.68□□□□□ -0.06
USB1-214ENST00000568848 FAM199XQ6PEV8 388 aaPredicted RBP14.68□□□□□ -0.06
USB1-214ENST00000568848 TMCO3Q6UWJ1 677 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 APTXQ7Z2E3 356 aaKnown RBP14.68□□□□□ -0.06
USB1-214ENST00000568848 POLNQ7Z5Q5 900 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms