RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 OGFOD2Q6N063 350 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 HMBOX1Q6NT76 420 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 ZNF549Q6P9A3 640 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 RNF19BQ6ZMZ0 732 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 RPS27LQ71UM5 84 aaKnown RBP16.69■□□□□ 0.26
CMTM3-213ENST00000566756 ARHGAP22Q7Z5H3 698 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 TFAP2DQ7Z6R9 452 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 PTGR2Q8N8N7 351 aaPredicted RBP16.69■□□□□ 0.26
CMTM3-213ENST00000566756 FBXO22Q8NEZ5 403 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 TSPAN14Q8NG11 270 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 TRIM43Q96BQ3 446 aaPredicted RBP16.69■□□□□ 0.26
CMTM3-213ENST00000566756 SLC45A3Q96JT2 553 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 C3orf30Q96M34 536 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 TBATAQ96M53 351 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 ATOH8Q96SQ7 321 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 TCF12Q99081 682 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 AARSD1Q9BTE6 412 aaKnown RBP16.69■□□□□ 0.26
CMTM3-213ENST00000566756 RETREG1Q9H6L5 497 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 SYTL2Q9HCH5 934 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 TIMMDC1Q9NPL8 285 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 SDR39U1Q9NRG7 319 aaPredicted RBP16.69■□□□□ 0.26
CMTM3-213ENST00000566756 TMEM45AQ9NWC5 275 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.69■□□□□ 0.264e-6■■□□□ 12.2
CMTM3-213ENST00000566756 NUDT5Q9UKK9 219 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 MYRFQ9Y2G1 1151 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 RAMP2O60895 175 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 MTHFD2P13995 350 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 ATP6V1B1P15313 513 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 LBPP18428 481 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 GPR15P49685 360 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 INPP5AQ14642 412 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 NRF1Q16656 503 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 EFL1Q7Z2Z2 1120 aaKnown RBP16.69■□□□□ 0.26
CMTM3-213ENST00000566756 RETREG3Q86VR2 466 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 CMTR2Q8IYT2 770 aaKnown RBP16.69■□□□□ 0.26
CMTM3-213ENST00000566756 PGBD5Q8N414 524 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 TMEM199Q8N511 208 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 TTC9BQ8N6N2 239 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 OR9I1Q8NGQ6 314 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 TWIST2Q8WVJ9 160 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 TUBA8Q9NY65 449 aaPredicted RBP16.69■□□□□ 0.26
CMTM3-213ENST00000566756 ACTR3BQ9P1U1 418 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 MAP10Q9P2G4 905 aa16.69■□□□□ 0.26
CMTM3-213ENST00000566756 PTBP2Q9UKA9 531 aaKnown RBP16.69■□□□□ 0.26
CMTM3-213ENST00000566756 ANKRD36A6QL64 1941 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 HTRA2O43464 458 aaPredicted RBP16.68■□□□□ 0.26
CMTM3-213ENST00000566756 KERAO60938 352 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 CNTN5O94779 1100 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 BAIAP3O94812 1187 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 GOT2P00505 430 aaKnown RBP16.68■□□□□ 0.26
CMTM3-213ENST00000566756 IGLV3-27P01718 113 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 IDO1P14902 403 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 CSF2RAP15509 400 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 PSMA3P25788 255 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 ARPP19P56211 112 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 POLD3Q15054 466 aaPredicted RBP16.68■□□□□ 0.26
CMTM3-213ENST00000566756 KIF19Q2TAC6 998 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 PABPC1LQ4VXU2 614 aaKnown RBP16.68■□□□□ 0.26
CMTM3-213ENST00000566756 NHSL2Q5HYW2 709 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 FBXL22Q6P050 247 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 PRSS55Q6UWB4 352 aaPredicted RBP16.68■□□□□ 0.26
CMTM3-213ENST00000566756 ZBTB49Q6ZSB9 765 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 SPATA19Q7Z5L4 167 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 PIM3Q86V86 326 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 KIAA1191Q96A73 305 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 TMEM79Q9BSE2 394 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 VN1R3Q9BXE9 311 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 C1QTNF3Q9BXJ4 246 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 DERL2Q9GZP9 239 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 SEMA6AQ9H2E6 1030 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 CATSPERZQ9NTU4 200 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 HSFX1Q9UBD0 423 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 CEPT1Q9Y6K0 416 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 TYW5A2RUC4 315 aaKnown RBP16.68■□□□□ 0.26
CMTM3-213ENST00000566756 NME4O00746 187 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 ANGPT2O15123 496 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 PRAMEF11O60813 436 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 CSPG5O95196 566 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 SOD2P04179 222 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 ARSAP15289 507 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 STC1P52823 247 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 LBX1P52954 281 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 WDR5P61964 334 aaKnown RBP16.68■□□□□ 0.26
CMTM3-213ENST00000566756 RING1Q06587 406 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 SDHAF4Q5VUM1 108 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 LDB1Q86U70 411 aaPredicted RBP16.68■□□□□ 0.26
CMTM3-213ENST00000566756 SLC39A11Q8N1S5 342 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 OR52K2Q8NGK3 314 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 OR4L1Q8NH43 312 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 STAG3L4Q8TBR4 150 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 TFAP2CQ92754 450 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 ZNF558Q96NG5 402 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 SLC29A1Q99808 456 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 TMEM106CQ9BVX2 250 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 NUSAP1Q9BXS6 441 aaKnown RBP16.68■□□□□ 0.26
CMTM3-213ENST00000566756 TRIM54Q9BYV2 358 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 CRISPLD1Q9H336 500 aa16.68■□□□□ 0.26
CMTM3-213ENST00000566756 NOL11Q9H8H0 719 aaKnown RBP16.68■□□□□ 0.26
CMTM3-213ENST00000566756 FBRSL1Q9HCM7 1045 aaKnown RBP16.68■□□□□ 0.26
CMTM3-213ENST00000566756 MID1IP1Q9NPA3 183 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms