RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 MSLNQ13421 630 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 TMPRSS12Q86WS5 348 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 PDCD7Q8N8D1 485 aaKnown RBP13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 CCDC89Q8N998 374 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 GPR26Q8NDV2 337 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 BLOC1S5Q8TDH9 187 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 COX14Q96I36 57 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 TMEM168Q9H0V1 697 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 CARS2Q9HA77 564 aaKnown RBP13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 ETNK1Q9HBU6 452 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 HACD3Q9P035 362 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 SLC17A4Q9Y2C5 497 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 U3KQA8 63 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 EME2A4GXA9 379 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 INPP4BO15327 924 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 AP2A1O95782 977 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 FUCA1P04066 466 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 GP1BAP07359 652 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 IVLP07476 585 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 MYF5P13349 255 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 BPIP17213 487 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 HMGCLP35914 325 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 DCDC1P59894 354 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 NR0B2Q15466 257 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 TCEA2Q15560 299 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 CYP1B1Q16678 543 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 TTC27Q6P3X3 843 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 CCNI2Q6ZMN8 369 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 GSTA5Q7RTV2 222 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 GLT6D1Q7Z4J2 308 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 TAF8Q7Z7C8 310 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 MAGOHBQ96A72 148 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 LRRC45Q96CN5 670 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 SCARF2Q96GP6 870 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 CNTNAP3BQ96NU0 1288 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 ZSCAN5AQ9BUG6 496 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 SPATA16Q9BXB7 569 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 CNTNAP3Q9BZ76 1288 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 LRRC40Q9H9A6 602 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 TRNAU1APQ9NX07 287 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 PAK5Q9P286 719 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 NFKBIL1Q9UBC1 381 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 CNOT6Q9ULM6 557 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 SUFUQ9UMX1 484 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 TMEM98Q9Y2Y6 226 aa13.73□□□□□ -0.21
HERPUD1-210ENST00000565966 ZNF106Q9H2Y7 1883 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 AKAP13Q12802 2813 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 CPED1A4D0V7 1026 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 CTAGE9A4FU28 777 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 FADS2P1A8MWK0 482 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 ASMTLO95671 621 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 JUPP14923 745 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 COILP38432 576 aaPredicted RBP13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 GNPDA1P46926 289 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 POLD2P49005 469 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 SEMA5AQ13591 1074 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 PDPK2PQ6A1A2 396 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 DOK6Q6PKX4 331 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 C4orf22Q6V702 233 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 SLC35F3Q8IY50 421 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 TRAM1L1Q8N609 369 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 ARL10Q8N8L6 244 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 IFI44Q8TCB0 444 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 GPBAR1Q8TDU6 330 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 PLEKHG4BQ96PX9 1271 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 GSDMCQ9BYG8 508 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 BPIFA1Q9NP55 256 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 RAB6BQ9NRW1 208 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 IL17CQ9P0M4 197 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 VPS18Q9P253 973 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 GULP1Q9UBP9 304 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 GPR34Q9UPC5 381 aa13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 MAP1BP46821 2468 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-210ENST00000565966 ERI2A8K979 691 aaKnown RBP13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 BUD23O43709 281 aaKnown RBP13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 PHF2O75151 1096 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 SUN1O94901 812 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 INSM1Q01101 510 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 ILF3Q12906 894 aaKnown RBP eCLIP13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 PEX6Q13608 980 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 TAF1AQ15573 450 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 KCTD19Q17RG1 926 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 PYCR3Q53H96 274 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 ZDHHC20Q5W0Z9 365 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 ALS2CLQ60I27 953 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 GUSBP11Q6P575 273 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 OGFOD3Q6PK18 319 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 EFL1Q7Z2Z2 1120 aaKnown RBP13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 TRIM74Q86UV6 250 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 CREG2Q8IUH2 290 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 CACTIN-AS1Q8N1I8 211 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 FAM46DQ8NEK8 389 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 OR6C4Q8NGE1 309 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 CCL4L1Q8NHW4 92 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 DTX3LQ8TDB6 740 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 PTCD2Q8WV60 388 aaKnown RBP13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 GATA6Q92908 595 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 NAT6Q93015 286 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 TMEM121BQ9BXQ6 578 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms