RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SUDS3Q9H7L9 328 aaPredicted RBP11.05□□□□□ -0.64
SF3B3-205ENST00000564899 POLMQ9NP87 494 aaPredicted RBP11.05□□□□□ -0.64
SF3B3-205ENST00000564899 NSMCE4AQ9NXX6 385 aa11.05□□□□□ -0.64
SF3B3-205ENST00000564899 PKD2L2Q9NZM6 624 aa11.05□□□□□ -0.64
SF3B3-205ENST00000564899 TXNDC16Q9P2K2 825 aa11.05□□□□□ -0.64
SF3B3-205ENST00000564899 PSMC3IPQ9P2W1 217 aaPredicted RBP11.05□□□□□ -0.64
SF3B3-205ENST00000564899 SCML1Q9UN30 329 aa11.05□□□□□ -0.64
SF3B3-205ENST00000564899 ANKRD36A6QL64 1941 aa11.05□□□□□ -0.64
SF3B3-205ENST00000564899 IGSF10Q6WRI0 2623 aa11.05□□□□□ -0.64
SF3B3-205ENST00000564899 CKAP5Q14008 2032 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 MYLKQ15746 1914 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 OR51F1A6NGY5 319 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 H7C0S8 307 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 PSMD11O00231 422 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 UGT1A9O60656 530 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 EPN2O95208 641 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 ELFN1P0C7U0 828 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 ACADMP11310 421 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 BPIP17213 487 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 NDUFV2P19404 249 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 GCAP28676 217 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 LIG3P49916 1009 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 DGKEP52429 567 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 SFSWAPQ12872 951 aaKnown RBP11.04□□□□□ -0.64
SF3B3-205ENST00000564899 GPS2Q13227 327 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 TMED2Q15363 201 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 TMEM52BQ4KMG9 183 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 FASTKD1Q53R41 847 aaKnown RBP11.04□□□□□ -0.64
SF3B3-205ENST00000564899 PLA2G2CQ5R387 149 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 ZDHHC20Q5W0Z9 365 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 FAM151BQ6UXP7 276 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 PACS1Q6VY07 963 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 SYT13Q7L8C5 426 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 HSD11B1LQ7Z5J1 315 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 WDR5BQ86VZ2 330 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 CNTN4Q8IWV2 1026 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 LMNTD2Q8IXW0 634 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 CBARPQ8N350 705 aaPredicted RBP11.04□□□□□ -0.64
SF3B3-205ENST00000564899 RIBC1Q8N443 379 aaPredicted RBP11.04□□□□□ -0.64
SF3B3-205ENST00000564899 CXorf40AQ8TE69 158 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 DCAKDQ8WVC6 231 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 MRGPRX1Q96LB2 322 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 AGAP2Q99490 1192 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 CPNE1Q99829 537 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 IER2Q9BTL4 223 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 WRAP53Q9BUR4 548 aaKnown RBP11.04□□□□□ -0.64
SF3B3-205ENST00000564899 UGT1A7Q9HAW7 530 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 UGT1A10Q9HAW8 530 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 UGT1A8Q9HAW9 530 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 RAD18Q9NS91 495 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 CATSPERZQ9NTU4 200 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 FBXL12Q9NXK8 326 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 CTNNAL1Q9UBT7 734 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 SERGEFQ9UGK8 458 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 ZNF180Q9UJW8 692 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 FADS3Q9Y5Q0 445 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 SLC30A1Q9Y6M5 507 aa11.04□□□□□ -0.64
SF3B3-205ENST00000564899 GLYATL1P3A0A0U1RQE8 302 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 GOLGA8CPA6NN73 597 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 CD3EAPO15446 510 aaKnown RBP11.03□□□□□ -0.64
SF3B3-205ENST00000564899 RGS16O15492 202 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-205ENST00000564899 AP1G1O43747 822 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 FAM155BO75949 473 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 PRAMEF1O95521 474 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 ZNF806P0C7X5 589 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 C7P10643 843 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 GABRG2P18507 467 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 ITGALP20701 1170 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 OGNP20774 298 aaKnown RBP11.03□□□□□ -0.64
SF3B3-205ENST00000564899 FOXN2P32314 431 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 GP5P40197 560 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 SLC1A2P43004 574 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 SPINT3P49223 89 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 SERPINB9P50453 376 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 CSE1LP55060 971 aaKnown RBP11.03□□□□□ -0.64
SF3B3-205ENST00000564899 XIAPP98170 497 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 PEX6Q13608 980 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 ACOX1Q15067 660 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 RASA2Q15283 850 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 HSP90B2PQ58FF3 399 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 ZRANB3Q5FWF4 1079 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 MRNIPQ6NTE8 343 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 ADGRD1Q6QNK2 874 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 LIPIQ6XZB0 460 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 RFLNAQ6ZTI6 216 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 KIAA0408Q6ZU52 694 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 TAOK1Q7L7X3 1001 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 STRA8Q7Z7C7 330 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 DENND6AQ8IWF6 608 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 C2CD4AQ8NCU7 369 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-205ENST00000564899 GPR26Q8NDV2 337 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 TSTD1Q8NFU3 115 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 HMGB4Q8WW32 186 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.03□□□□□ -0.64
SF3B3-205ENST00000564899 FAM131CQ96AQ9 280 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 PLEKHG4BQ96PX9 1271 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 SH3GL2Q99962 352 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 TMBIM4Q9HC24 238 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 EURLQ9NYK6 297 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 BCCIPQ9P287 314 aaKnown RBP eCLIP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms