RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 IL4RP24394 825 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 PSMA4P25789 261 aaKnown RBP11.03□□□□□ -0.64
TCF4-222ENST00000564228 SERPINB1P30740 379 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 POLR2IP36954 125 aaKnown RBP11.03□□□□□ -0.64
TCF4-222ENST00000564228 KRT6CP48668 564 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 BCAT1P54687 386 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 RAD23AP54725 363 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 BST2Q10589 180 aaKnown RBP11.03□□□□□ -0.64
TCF4-222ENST00000564228 RALGDSQ12967 914 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 SLC12A1Q13621 1099 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 AASDHQ4L235 1098 aaPredicted RBP11.03□□□□□ -0.64
TCF4-222ENST00000564228 INTS6LQ5JSJ4 861 aaKnown RBP11.03□□□□□ -0.64
TCF4-222ENST00000564228 VARS2Q5ST30 1063 aaKnown RBP11.03□□□□□ -0.64
TCF4-222ENST00000564228 ATAD3BQ5T9A4 648 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 LCN8Q6JVE9 175 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 PRMT9Q6P2P2 845 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 KCNT2Q6UVM3 1135 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 FKBP10Q96AY3 582 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 PCED1BQ96HM7 432 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 CSF3RQ99062 836 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 SH3GL1Q99961 368 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 B3GNT5Q9BYG0 378 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 RC3H2Q9HBD1 1191 aaKnown RBP11.03□□□□□ -0.64
TCF4-222ENST00000564228 VWA7Q9Y334 891 aa11.03□□□□□ -0.64
TCF4-222ENST00000564228 MRPL42Q9Y6G3 142 aaKnown RBP11.03□□□□□ -0.64
TCF4-222ENST00000564228 ISPDA4D126 451 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 MRASO14807 208 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 SYN3O14994 580 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 OR4Q2P0C623 313 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 CHRNB1P11230 501 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 HSD17B1P14061 328 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 GRIA1P42261 906 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 RPS9P46781 194 aaKnown RBP11.02□□□□□ -0.65
TCF4-222ENST00000564228 TRPC1P48995 793 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 NR2C2P49116 596 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 CSRP3P50461 194 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 ATP4BP51164 291 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 CSE1LP55060 971 aaKnown RBP11.02□□□□□ -0.65
TCF4-222ENST00000564228 GABARAPL2P60520 117 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 TSPY1Q01534 308 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 ILF2Q12905 390 aaKnown RBP11.02□□□□□ -0.65
TCF4-222ENST00000564228 SKIV2LQ15477 1246 aaKnown RBP11.02□□□□□ -0.65
TCF4-222ENST00000564228 PKDCCQ504Y2 493 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 PMF1Q6P1K2 205 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 BTLAQ7Z6A9 289 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 LINC00523Q86TU6 105 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 FAM35AQ86V20 835 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 DCP2Q8IU60 420 aaKnown RBP11.02□□□□□ -0.65
TCF4-222ENST00000564228 GALNT13Q8IUC8 556 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 ARMC8Q8IUR7 673 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 CMTR2Q8IYT2 770 aaKnown RBP11.02□□□□□ -0.65
TCF4-222ENST00000564228 LSMEM2Q8N112 164 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 PCDH19Q8TAB3 1148 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 MYLPFQ96A32 169 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 MYRFLQ96LU7 910 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 RHOBTB2Q9BYZ6 727 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 CEP44Q9C0F1 390 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 LHPPQ9H008 270 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 MUC13Q9H3R2 512 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 TMLHEQ9NVH6 421 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 INTS10Q9NVR2 710 aaKnown RBP11.02□□□□□ -0.65
TCF4-222ENST00000564228 MTRRQ9UBK8 725 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 ZNF639Q9UID6 485 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 SLC27A5Q9Y2P5 690 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 PLXNA4Q9HCM2 1894 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 MYO16Q9Y6X6 1858 aa11.02□□□□□ -0.65
TCF4-222ENST00000564228 BBIP1A8MTZ0 92 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 SCO2O43819 266 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 UGT2B11O75310 529 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 BCAS1O75363 584 aaPredicted RBP11.01□□□□□ -0.65
TCF4-222ENST00000564228 BEST1O76090 585 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 GJB5O95377 273 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 SNRPB2P08579 225 aaKnown RBP11.01□□□□□ -0.65
TCF4-222ENST00000564228 TFE3P19532 575 aaPredicted RBP11.01□□□□□ -0.65
TCF4-222ENST00000564228 CA8P35219 290 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 PLA2G16P53816 162 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 IFITM3Q01628 133 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 ELAVL2Q12926 359 aaKnown RBP11.01□□□□□ -0.65
TCF4-222ENST00000564228 FASTKQ14296 549 aaKnown RBP11.01□□□□□ -0.65
TCF4-222ENST00000564228 DLG2Q15700 870 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 PSMD5Q16401 504 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 CTXN3Q4LDR2 81 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 PPP2R2DQ66LE6 453 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 UGT3A1Q6NUS8 523 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 PRR23CQ6ZRP0 262 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 SLC16A12Q6ZSM3 486 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 PAQR9Q6ZVX9 377 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 TAS1R1Q7RTX1 841 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 C11orf74Q86VG3 221 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 LRRTM3Q86VH5 581 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 LRRC49Q8IUZ0 686 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 OFCC1Q8IZS5 231 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 KDM1BQ8NB78 822 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 TRPV3Q8NET8 790 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 BPIFB6Q8NFQ5 453 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 SLC35F5Q8WV83 523 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 MED30Q96HR3 178 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 IGSF21Q96ID5 467 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 MARK4Q96L34 752 aa11.01□□□□□ -0.65
TCF4-222ENST00000564228 PPP1R36Q96LQ0 422 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms