RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 INAFM1C9JVW0 142 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 F5H0A9 414 aaPredicted RBP5.07□□□□□ -1.6
LINC00254-201ENST00000563416 PEX12O00623 359 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 ASAP2O43150 1006 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 SERPINC1P01008 464 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 POLBP06746 335 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 CKMT1AP12532 417 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 MX1P20591 662 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 CNTFP26441 200 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 LIFRP42702 1097 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 CLNS1AP54105 237 aaKnown RBP5.07□□□□□ -1.6
LINC00254-201ENST00000563416 DYNLL1P63167 89 aaKnown RBP5.07□□□□□ -1.6
LINC00254-201ENST00000563416 ZXDBP98169 803 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 MAP2K1Q02750 393 aaPredicted RBP5.07□□□□□ -1.6
LINC00254-201ENST00000563416 TRAF2Q12933 501 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 TRPC3Q13507 836 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 VGLL4Q14135 290 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 RPE65Q16518 533 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 FAM133BQ5BKY9 247 aaKnown RBP5.07□□□□□ -1.6
LINC00254-201ENST00000563416 SLC9C2Q5TAH2 1124 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 ZNF367Q7RTV3 350 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.07□□□□□ -1.6
LINC00254-201ENST00000563416 PRR26Q8N8Z3 221 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 KBTBD3Q8NAB2 608 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 ZMIZ2Q8NF64 920 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 ELP5Q8TE02 316 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 HSPH1Q92598 858 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 ATOH1Q92858 354 aaPredicted RBP5.07□□□□□ -1.6
LINC00254-201ENST00000563416 ZNF479Q96JC4 524 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 APOLD1Q96LR9 279 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 CD180Q99467 661 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 SEZ6LQ9BYH1 1024 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 STN1Q9H668 368 aaKnown RBP5.07□□□□□ -1.6
LINC00254-201ENST00000563416 ALKBH4Q9NXW9 302 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 TTLL3Q9Y4R7 772 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 EVPLQ92817 2033 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 SMCHD1A6NHR9 2005 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 A0A1B0GVT2 93 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 A6NCN8 305 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 I6L893 689 aaPredicted RBP5.06□□□□□ -1.6
LINC00254-201ENST00000563416 CLDN7O95471 211 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 TBX18O95935 607 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 ZFYP08048 801 aaPredicted RBP5.06□□□□□ -1.6
LINC00254-201ENST00000563416 CHRM4P08173 479 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 HSPA8P11142 646 aaKnown RBP5.06□□□□□ -1.6
LINC00254-201ENST00000563416 GNLYP22749 145 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 TRAF1Q13077 416 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 ZSCAN25Q6NSZ9 544 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 Q6ZSV7 163 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 TRILQ7L0X0 811 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 MON1BQ7L1V2 547 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 MEPCEQ7L2J0 689 aaKnown RBP5.06□□□□□ -1.6
LINC00254-201ENST00000563416 FASTKD5Q7L8L6 764 aaKnown RBP5.06□□□□□ -1.6
LINC00254-201ENST00000563416 KRT77Q7Z794 578 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 PATL1Q86TB9 770 aaKnown RBP5.06□□□□□ -1.6
LINC00254-201ENST00000563416 TRIM74Q86UV6 250 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 TRIM73Q86UV7 250 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 CHD1LQ86WJ1 897 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 ERO1BQ86YB8 467 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 TEX45Q8NA69 505 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 MIGA1Q8NAN2 632 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 NOC3LQ8WTT2 800 aaKnown RBP5.06□□□□□ -1.6
LINC00254-201ENST00000563416 OPTNQ96CV9 577 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 TWNKQ96RR1 684 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 TREX2Q9BQ50 279 aaPredicted RBP5.06□□□□□ -1.6
LINC00254-201ENST00000563416 LHPPQ9H008 270 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 CXorf56Q9H5V9 222 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 DNAJC18Q9H819 358 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 ZNF236Q9UL36 1845 aa5.06□□□□□ -1.6
LINC00254-201ENST00000563416 ROBO3Q96MS0 1386 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 KLK10O43240 276 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 ADAP00813 363 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 TGFB3P10600 412 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 HOXA11P31270 313 aaPredicted RBP5.05□□□□□ -1.6
LINC00254-201ENST00000563416 CCKBRP32239 447 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 COPB2P35606 906 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 PTPN9P43378 593 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 PCYT1AP49585 367 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 CTCFP49711 727 aaPredicted RBP5.05□□□□□ -1.6
LINC00254-201ENST00000563416 CRYZQ08257 329 aaKnown RBP5.05□□□□□ -1.6
LINC00254-201ENST00000563416 Q0VFX4 171 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 SREBF2Q12772 1141 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 PPIL2Q13356 520 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 SLC18A3Q16572 532 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 MAP3K21Q5TCX8 1036 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 C16orf54Q6UWD8 224 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 IL20RBQ6UXL0 311 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 HEATR4Q86WZ0 1026 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 FOXP4Q8IVH2 680 aaPredicted RBP5.05□□□□□ -1.6
LINC00254-201ENST00000563416 ADHFE1Q8IWW8 467 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 SCYL3Q8IZE3 742 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 RBFAQ8N0V3 343 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 OR4N2Q8NGD1 307 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 CNOT9Q92600 299 aaKnown RBP5.05□□□□□ -1.6
LINC00254-201ENST00000563416 STAMQ92783 540 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 ZKSCAN4Q969J2 545 aaPredicted RBP5.05□□□□□ -1.6
LINC00254-201ENST00000563416 TMEM18Q96B42 140 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 PHF21BQ96EK2 531 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 REEP2Q9BRK0 252 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 CRNKL1Q9BZJ0 848 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms