RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 PMEPA1Q969W9 287 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 HDAC11Q96DB2 347 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 PACSIN1Q9BY11 444 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 HAUS2Q9NVX0 235 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 DTLQ9NZJ0 730 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 IFNKQ9P0W0 207 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 VPS18Q9P253 973 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 PDP2Q9P2J9 529 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 UVRAGQ9P2Y5 699 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 PRKAB1Q9Y478 270 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 B3GALT1Q9Y5Z6 326 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 OAS3Q9Y6K5 1087 aaKnown RBP15.62■□□□□ 0.09
CLK3-211ENST00000563297 BOD1L1Q8NFC6 3051 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 C1orf232A0A0U1RR37 186 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 FADS2P1A8MWK0 482 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 ANKRD66B4E2M5 251 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 STMND1H3BQB6 276 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 JCHAINP01591 159 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 KRT7P08729 469 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 ITGB6P18564 788 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 CA4P22748 312 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 KDELR1P24390 212 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 HNRNPH3P31942 346 aaKnown RBP15.61■□□□□ 0.09
CLK3-211ENST00000563297 CSTF2P33240 577 aaKnown RBP eCLIP15.61■□□□□ 0.09
CLK3-211ENST00000563297 CYP4F2P78329 520 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 TBR1Q16650 682 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 QPCTQ16769 361 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 HENMT1Q5T8I9 393 aaKnown RBP15.61■□□□□ 0.09
CLK3-211ENST00000563297 CHST15Q7LFX5 561 aaPredicted RBP15.61■□□□□ 0.09
CLK3-211ENST00000563297 CCDC13Q8IYE1 715 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 CNTD1Q8N815 330 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 ART4Q93070 314 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 RNF157Q96PX1 679 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 SLC38A3Q99624 504 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 ARHGAP9Q9BRR9 750 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 MLPHQ9BV36 600 aaPredicted RBP15.61■□□□□ 0.09
CLK3-211ENST00000563297 FAM83DQ9H4H8 585 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 OCIAD1Q9NX40 245 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 TBC1D29Q9UFV1 150 aa15.61■□□□□ 0.09
CLK3-211ENST00000563297 SPTA1P02549 2419 aa15.6■□□□□ 0.09
CLK3-211ENST00000563297 GOLGA6L19H0YKK7 550 aa15.6■□□□□ 0.09
CLK3-211ENST00000563297 PYCARD-AS1I3L0S3 204 aa15.6■□□□□ 0.09
CLK3-211ENST00000563297 KCNK1O00180 336 aa15.6■□□□□ 0.09
CLK3-211ENST00000563297 CD86P42081 329 aa15.6■□□□□ 0.09
CLK3-211ENST00000563297 NFATC3Q12968 1075 aa15.6■□□□□ 0.09
CLK3-211ENST00000563297 SLC18A3Q16572 532 aa15.6■□□□□ 0.09
CLK3-211ENST00000563297 ASTE1Q2TB18 679 aaPredicted RBP15.6■□□□□ 0.09
CLK3-211ENST00000563297 FAM182AQ5T1J6 154 aa15.6■□□□□ 0.09
CLK3-211ENST00000563297 IYDQ6PHW0 289 aa15.6■□□□□ 0.09
CLK3-211ENST00000563297 HTR3CQ8WXA8 447 aa15.6■□□□□ 0.09
CLK3-211ENST00000563297 CTNNBL1Q8WYA6 563 aaPredicted RBP15.6■□□□□ 0.09
CLK3-211ENST00000563297 EID2BQ96D98 161 aa15.6■□□□□ 0.09
CLK3-211ENST00000563297 AHCYL2Q96HN2 611 aaKnown RBP15.6■□□□□ 0.09
CLK3-211ENST00000563297 DDA1Q9BW61 102 aa15.6■□□□□ 0.09
CLK3-211ENST00000563297 SLC12A9Q9BXP2 914 aa15.6■□□□□ 0.09
CLK3-211ENST00000563297 SLC39A1Q9NY26 324 aa15.6■□□□□ 0.09
CLK3-211ENST00000563297 TLN1Q9Y490 2541 aaKnown RBP15.6■□□□□ 0.09
CLK3-211ENST00000563297 RGSL1A5PLK6 1076 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 B4E171 279 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 SLC28A2O43868 658 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 FAM87AP0C7U9 286 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 UGT1A3P35503 534 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 TSPAN7P41732 249 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 HHEXQ03014 270 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 PPIDQ08752 370 aaKnown RBP15.59■□□□□ 0.09
CLK3-211ENST00000563297 ZBTB17Q13105 803 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 ARHGAP22Q7Z5H3 698 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 PLD5Q8N7P1 536 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 OR10G6Q8NH81 332 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 CCHCR1Q8TD31 782 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 RMI1Q9H9A7 625 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 SARS2Q9NP81 518 aaKnown RBP15.59■□□□□ 0.09
CLK3-211ENST00000563297 STARD5Q9NSY2 213 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 PKD2L2Q9NZM6 624 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 LCMT1Q9UIC8 334 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 KCNK6Q9Y257 313 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.59■□□□□ 0.093e-7■■■□□ 15.1
CLK3-211ENST00000563297 MYO18BQ8IUG5 2567 aa15.59■□□□□ 0.09
CLK3-211ENST00000563297 A6NCN8 305 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 EFCAB7A8K855 629 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 A8MU76 341 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 ACP5P13686 325 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 MAN1A1P33908 653 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 ATP1A2P50993 1020 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 IFI35P80217 286 aaPredicted RBP15.58■□□□□ 0.08
CLK3-211ENST00000563297 NFATC2Q13469 925 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 MESDQ14696 234 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 ZFYVE27Q5T4F4 411 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 DCAF12Q5T6F0 453 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 WDR74Q6RFH5 385 aaPredicted RBP15.58■□□□□ 0.08
CLK3-211ENST00000563297 LYSMD3Q7Z3D4 306 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 FAM129CQ86XR2 697 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 BMPERQ8N8U9 685 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 CCDC112Q8NEF3 446 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 NCSTNQ92542 709 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 ADGRE3Q9BY15 652 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 ASPSCR1Q9BZE9 553 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 SPRY4Q9C004 299 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 FAM117AQ9C073 453 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 XPO4Q9C0E2 1151 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms