RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 WISP3O95389 354 aaPredicted RBP13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 GLP2RO95838 553 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 CYBBP04839 570 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 INHBBP09529 407 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 PHEXP78562 749 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 CLCQ05315 142 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 PAN2Q504Q3 1202 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 PDCD4Q53EL6 469 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 COQ5Q5HYK3 327 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 MARC1Q5VT66 337 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 GALNT18Q6P9A2 607 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 ZNF773Q6PK81 442 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 SCIMPQ6UWF3 145 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 SFRP1Q8N474 314 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 C3orf58Q8NDZ4 430 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 PNPT1Q8TCS8 783 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 RSPH1Q8WYR4 309 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 NRBF2Q96F24 287 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 CSNK1G1Q9HCP0 422 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 SLAMF8Q9P0V8 285 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 BLOC1S6Q9UL45 172 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 GPR45Q9Y5Y3 372 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 OTOFQ9HC10 1997 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 A0A1B0GTL3 188 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 CFAP99D6REC4 459 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 J3KR12 359 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 KPNA6O60684 536 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 HOXD8P13378 290 aaPredicted RBP13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 FDXRP22570 491 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 ADARB1P78563 741 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 SLC10A7Q0GE19 358 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 SPATS1Q496A3 300 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 HABP4Q5JVS0 413 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 ZNF549Q6P9A3 640 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 PTRH1Q86Y79 214 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 CLEC4FQ8N1N0 589 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 SLC15A4Q8N697 577 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 OR13F1Q8NGS4 319 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 CASP10Q92851 521 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 GLT1D1Q96MS3 346 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 C1orf50Q9BV19 199 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 SUN2Q9UH99 717 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 MBLAC1A4D2B0 266 aaPredicted RBP13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 VPS4BO75351 444 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 FUCA1P04066 466 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 THP07101 528 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 MTHFD2P13995 350 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 HOXC13P31276 330 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 MAGEA10P43363 369 aaPredicted RBP13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 BCAP31P51572 246 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 TMBIM6P55061 237 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 UFM1P61960 85 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 YWHAHQ04917 246 aaPredicted RBP13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 GRSF1Q12849 480 aaKnown RBP eCLIP13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 LCP2Q13094 533 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 ITGADQ13349 1161 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 BFSP2Q13515 415 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 PTPRCAPQ14761 206 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 TIGD2Q4W5G0 525 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 SIRPB2Q5JXA9 342 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 MANEALQ5VSG8 457 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 BROXQ5VW32 411 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 USP51Q70EK9 711 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 GALNT7Q86SF2 657 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 FBXO39Q8N4B4 442 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 TRIM62Q9BVG3 475 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 ARMC7Q9H6L4 198 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 UXTQ9UBK9 157 aaPredicted RBP13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 LEF1Q9UJU2 399 aaPredicted RBP13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 RNF112Q9ULX5 631 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 ANKRD12Q6UB98 2062 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 CD3EAPO15446 510 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 SLC22A3O75751 556 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 ESRRBO95718 433 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 GOT2P00505 430 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 IGLV3-25P01717 112 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 MBL2P11226 248 aaPredicted RBP13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 ZNF37AP17032 561 aaPredicted RBP13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 HTR7P34969 479 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 TPD52P55327 224 aaPredicted RBP13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 EEFSECP57772 596 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 PYCR3Q53H96 274 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 SPATA19Q7Z5L4 167 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 KIAA2013Q8IYS2 634 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 PAPD5Q8NDF8 572 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 BLOC1S5Q8TDH9 187 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 NSMCE2Q96MF7 247 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 BEGAINQ9BUH8 593 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 AGO3Q9H9G7 860 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 NANOGQ9H9S0 305 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 SP110Q9HB58 689 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 ATP13A1Q9HD20 1204 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 SLC52A3Q9NQ40 469 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 ABCC13Q9NSE7 274 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 INTS7Q9NVH2 962 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 GNPTGQ9UJJ9 305 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 CORINQ9Y5Q5 1042 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 HS3ST4Q9Y661 456 aa13.89□□□□□ -0.19
VPS9D1-202ENST00000561976 DYTNA2CJ06 578 aa13.88□□□□□ -0.19
VPS9D1-202ENST00000561976 TYW5A2RUC4 315 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms