RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 ZWILCHQ9H900 591 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 PRDM8Q9NQV8 689 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 FBXO8Q9NRD0 319 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 PLEKHB1Q9UF11 243 aaPredicted RBP10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 LNPEPQ9UIQ6 1025 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 CROTQ9UKG9 612 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 POLHQ9Y253 713 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 KCNK6Q9Y257 313 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 KCNMB2Q9Y691 235 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 ICE1Q9Y2F5 2266 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 SPTAN1Q13813 2472 aaKnown RBP10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 PIPSLA2A3N6 862 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 H3BRJ5 948 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 MAP3K7O43318 606 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 HTRA2O43464 458 aaPredicted RBP10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 PGLSO95336 258 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 EML2O95834 649 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 PYGLP06737 847 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 MMP13P45452 471 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 UQCRFS1P47985 274 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 SEPHS1P49903 392 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 KRT31Q15323 416 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 MARC1Q5VT66 337 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 ACAD10Q6JQN1 1059 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 TMCO3Q6UWJ1 677 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 C6orf15Q6UXA7 325 aaPredicted RBP10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 ADAMTSL4Q6UY14 1074 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 ARHGAP22Q7Z5H3 698 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 PLXDC1Q8IUK5 500 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 TRIM48Q8IWZ4 208 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 TP53INP2Q8IXH6 220 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 MCOLN2Q8IZK6 566 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 SFRP1Q8N474 314 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 GALNT6Q8NCL4 622 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 EXD1Q8NHP7 514 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 HSPH1Q92598 858 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 SCRN2Q96FV2 425 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 TGM7Q96PF1 710 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 PEBP4Q96S96 227 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 RIOK2Q9BVS4 552 aaKnown RBP10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 TBC1D10AQ9BXI6 508 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 TWSG1Q9GZX9 223 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 CLSTN2Q9H4D0 955 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 SARS2Q9NP81 518 aaKnown RBP10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 NT5MQ9NPB1 228 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 PARVAQ9NVD7 372 aa10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 TMEM184BQ9Y519 407 aaPredicted RBP10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 OAS3Q9Y6K5 1087 aaKnown RBP10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 SPTBN1Q01082 2364 aaKnown RBP10.4□□□□□ -0.74
CDC42BPB-207ENST00000560492 USP9YO00507 2555 aaPredicted RBP10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 TCRBV5S1A1TA0A578 114 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 A1L4Q6 167 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 CLEC18AA5D8T8 446 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 A6NCN8 305 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 K7EM74 188 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 KIAA0754O94854 1291 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 DLGAP3O95886 979 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 CCDC172P0C7W6 258 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 CCNYL3P0C7X3 344 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 TYRP1P17643 537 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 AMD1P17707 334 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 GNLYP22749 145 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 TEAD1P28347 426 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 MIPP30301 263 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 UBXN1Q04323 297 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 DPTQ07507 201 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 SMTNL2Q2TAL5 461 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 CLEC18BQ6UXF7 455 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 PHYKPLQ8IUZ5 450 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 PGBD5Q8N414 524 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 CLEC18CQ8NCF0 446 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 SMIM14Q96QK8 99 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 OR6C1Q96RD1 312 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 AGAP2Q99490 1192 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 HERPUD2Q9BSE4 406 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 NUP62CLQ9H1M0 184 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 CWC15Q9P013 229 aaKnown RBP10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 PDP2Q9P2J9 529 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 TBC1D29Q9UFV1 150 aa10.39□□□□□ -0.75
CDC42BPB-207ENST00000560492 NDUFA10O95299 355 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 PDHA1P08559 390 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 FERP16591 822 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 ZNF28P17035 718 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 ZNF30P17039 623 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 AMPD1P23109 780 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 F8A1P23610 371 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 EPHA4P54764 986 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 GFERP55789 205 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 PLA2G4EQ3MJ16 856 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 TCTN3Q6NUS6 607 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 IYDQ6PHW0 289 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 LYSMD3Q7Z3D4 306 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 TECPR1Q7Z6L1 1165 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 TMEM135Q86UB9 458 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 AVL9Q8NBF6 648 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 CPT1CQ8TCG5 803 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 ZNF653Q96CK0 615 aa10.38□□□□□ -0.75
CDC42BPB-207ENST00000560492 SCARF2Q96GP6 870 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms