RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 GABPB2Q8TAK5 448 aaPredicted RBP12.18□□□□□ -0.46
USP8-209ENST00000560297 PYROXD1Q8WU10 500 aa12.18□□□□□ -0.46
USP8-209ENST00000560297 HEXDCQ8WVB3 486 aa12.18□□□□□ -0.46
USP8-209ENST00000560297 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.18□□□□□ -0.46
USP8-209ENST00000560297 GLYATL1Q969I3 302 aa12.18□□□□□ -0.46
USP8-209ENST00000560297 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.18□□□□□ -0.46
USP8-209ENST00000560297 ULK4Q96C45 1275 aa12.18□□□□□ -0.46
USP8-209ENST00000560297 MFSD3Q96ES6 412 aa12.18□□□□□ -0.46
USP8-209ENST00000560297 AGAP2Q99490 1192 aa12.18□□□□□ -0.46
USP8-209ENST00000560297 FMO2Q99518 471 aa12.18□□□□□ -0.46
USP8-209ENST00000560297 NUSAP1Q9BXS6 441 aaKnown RBP12.18□□□□□ -0.46
USP8-209ENST00000560297 ZDHHC5Q9C0B5 715 aa12.18□□□□□ -0.46
USP8-209ENST00000560297 ASB8Q9H765 288 aa12.18□□□□□ -0.46
USP8-209ENST00000560297 GPR27Q9NS67 375 aa12.18□□□□□ -0.46
USP8-209ENST00000560297 SMOXQ9NWM0 555 aa12.18□□□□□ -0.46
USP8-209ENST00000560297 ZC3H7BQ9UGR2 993 aaKnown RBP12.18□□□□□ -0.46
USP8-209ENST00000560297 CNOT6Q9ULM6 557 aaKnown RBP12.18□□□□□ -0.46
USP8-209ENST00000560297 ANKRD6Q9Y2G4 727 aa12.18□□□□□ -0.46
USP8-209ENST00000560297 FNDC3AQ9Y2H6 1198 aaKnown RBP12.18□□□□□ -0.46
USP8-209ENST00000560297 OR1A2Q9Y585 309 aa12.18□□□□□ -0.46
USP8-209ENST00000560297 SLCO1B1Q9Y6L6 691 aa12.18□□□□□ -0.46
USP8-209ENST00000560297 SDK1Q7Z5N4 2213 aa12.18□□□□□ -0.46
USP8-209ENST00000560297 SPTY2D1-AS1A0A0U1RR47 76 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 CCDC162PA2VCL2 907 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 FADS2P1A8MWK0 482 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 TNFRSF10CO14798 259 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 KHNYNO15037 678 aaKnown RBP12.17□□□□□ -0.46
USP8-209ENST00000560297 DFNA5O60443 496 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 UGT1A9O60656 530 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 VAPBO95292 243 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 GOT2P00505 430 aaKnown RBP12.17□□□□□ -0.46
USP8-209ENST00000560297 WNT1P04628 370 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 CFIP05156 583 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 TUBBP07437 444 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 SYPP08247 313 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 GSTA2P09210 222 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 ZNF806P0C7X5 589 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 UGT1A6P19224 532 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 UGT1A1P22309 533 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 UGT1A4P22310 534 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 MCM3P25205 808 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 UGT1A3P35503 534 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 UGT1A5P35504 534 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 NHLH1Q02575 133 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 PDE1CQ14123 709 aaPredicted RBP12.17□□□□□ -0.46
USP8-209ENST00000560297 NFATC4Q14934 902 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 LONRF1Q17RB8 773 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 FASTKD1Q53R41 847 aaKnown RBP12.17□□□□□ -0.46
USP8-209ENST00000560297 TRIM61Q5EBN2 209 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 ZRANB3Q5FWF4 1079 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 AARS2Q5JTZ9 985 aaKnown RBP12.17□□□□□ -0.46
USP8-209ENST00000560297 LDLRAP1Q5SW96 308 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 IL27RAQ6UWB1 636 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 CES3Q6UWW8 571 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 CERS6Q6ZMG9 384 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 TAS2R42Q7RTR8 314 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 SDCCAG8Q86SQ7 713 aaPredicted RBP12.17□□□□□ -0.46
USP8-209ENST00000560297 CCDC25Q86WR0 208 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 RELL1Q8IUW5 271 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 PHYKPLQ8IUZ5 450 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 IGDCC3Q8IVU1 814 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 PALM2Q8IXS6 379 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 ZBED8Q8IZ13 594 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 PELI3Q8N2H9 469 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.17□□□□□ -0.46
USP8-209ENST00000560297 FBXO36Q8NEA4 188 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 CALML6Q8TD86 181 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 FUBP1Q96AE4 644 aaKnown RBP12.17□□□□□ -0.46
USP8-209ENST00000560297 ZNF669Q96BR6 464 aaPredicted RBP12.17□□□□□ -0.46
USP8-209ENST00000560297 COX14Q96I36 57 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 FCRL3Q96P31 734 aaPredicted RBP12.17□□□□□ -0.46
USP8-209ENST00000560297 SUDS3Q9H7L9 328 aaPredicted RBP12.17□□□□□ -0.46
USP8-209ENST00000560297 ERVMER34-1Q9H9K5 563 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 UGT1A7Q9HAW7 530 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 UGT1A10Q9HAW8 530 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 UGT1A8Q9HAW9 530 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 CAPN10Q9HC96 672 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 TRIM39Q9HCM9 518 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 SAYSD1Q9NPB0 183 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 RRAGDQ9NQL2 400 aaPredicted RBP12.17□□□□□ -0.46
USP8-209ENST00000560297 NCDNQ9UBB6 729 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 NFU1Q9UMS0 254 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 THADAQ6YHU6 1953 aa12.17□□□□□ -0.46
USP8-209ENST00000560297 ATXN2Q99700 1313 aaKnown RBP12.16□□□□□ -0.46
USP8-209ENST00000560297 TRBV5-4A0A0C4DH59 114 aa12.16□□□□□ -0.46
USP8-209ENST00000560297 ZCWPW2A0A1B0GU75 182 aa12.16□□□□□ -0.46
USP8-209ENST00000560297 A0A1B0GVT2 93 aa12.16□□□□□ -0.46
USP8-209ENST00000560297 GPR89AB7ZAQ6 455 aa12.16□□□□□ -0.46
USP8-209ENST00000560297 CCL22O00626 93 aa12.16□□□□□ -0.46
USP8-209ENST00000560297 PFDN6O15212 129 aa12.16□□□□□ -0.46
USP8-209ENST00000560297 INPP4BO15327 924 aa12.16□□□□□ -0.46
USP8-209ENST00000560297 VEGFDO43915 354 aa12.16□□□□□ -0.46
USP8-209ENST00000560297 FOXD2O60548 495 aaPredicted RBP12.16□□□□□ -0.46
USP8-209ENST00000560297 BANF1O75531 89 aa12.16□□□□□ -0.46
USP8-209ENST00000560297 GPR89BP0CG08 455 aa12.16□□□□□ -0.46
USP8-209ENST00000560297 TNFRSF8P28908 595 aa12.16□□□□□ -0.46
USP8-209ENST00000560297 MAGEA4P43358 317 aa12.16□□□□□ -0.46
USP8-209ENST00000560297 ARCN1P48444 511 aaKnown RBP12.16□□□□□ -0.46
USP8-209ENST00000560297 NXPH1P58417 271 aa12.16□□□□□ -0.46
USP8-209ENST00000560297 FRG1Q14331 258 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms