RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 SKILP12757 684 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 CES1P23141 567 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 IL4RP24394 825 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 MPSTP25325 297 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 EPHB1P54762 984 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 POLE2P56282 527 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 HHEXQ03014 270 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 GALNT2Q10471 571 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 KCNAB2Q13303 367 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 ANO6Q4KMQ2 910 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 FILIP1LQ4L180 1135 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 HENMT1Q5T8I9 393 aaKnown RBP12.99□□□□□ -0.33
TPM1-220ENST00000559556 ANKS6Q68DC2 871 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 ARHGAP22Q7Z5H3 698 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 ZNF761Q86XN6 746 aaPredicted RBP12.99□□□□□ -0.33
TPM1-220ENST00000559556 ZNF564Q8TBZ8 553 aaPredicted RBP12.99□□□□□ -0.33
TPM1-220ENST00000559556 RTP4Q96DX8 246 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 AHCYL2Q96HN2 611 aaKnown RBP12.99□□□□□ -0.33
TPM1-220ENST00000559556 SLC45A3Q96JT2 553 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 CATSPER2Q96P56 530 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 LYSMD1Q96S90 227 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 AGAP2Q99490 1192 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 SLC38A3Q99624 504 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 RIOK2Q9BVS4 552 aaKnown RBP12.99□□□□□ -0.33
TPM1-220ENST00000559556 TDRD1Q9BXT4 1180 aaKnown RBP12.99□□□□□ -0.33
TPM1-220ENST00000559556 SPRY4Q9C004 299 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 ZMYND15Q9H091 742 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 NAT10Q9H0A0 1025 aaKnown RBP12.99□□□□□ -0.33
TPM1-220ENST00000559556 IP6K2Q9UHH9 426 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 ANAPC7Q9UJX3 599 aa12.99□□□□□ -0.33
TPM1-220ENST00000559556 PCYT1BQ9Y5K3 369 aaPredicted RBP12.99□□□□□ -0.33
TPM1-220ENST00000559556 OAS3Q9Y6K5 1087 aaKnown RBP12.99□□□□□ -0.33
TPM1-220ENST00000559556 A6NCN8 305 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 INPP4BO15327 924 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 MBD3O95983 291 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 PRLP01236 227 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 CD48P09326 243 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 CA4P22748 312 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 ZNF165P49910 485 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 ARSEP51690 589 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 EPHA4P54764 986 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 RPL26P61254 145 aaKnown RBP12.98□□□□□ -0.33
TPM1-220ENST00000559556 MC2RQ01718 297 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 DSC2Q02487 901 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 TLE1Q04724 770 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 MMRN1Q13201 1228 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 DPYSL3Q14195 570 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 KRT81Q14533 505 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 PAFAH1B3Q15102 231 aaKnown RBP12.98□□□□□ -0.33
TPM1-220ENST00000559556 FIGNQ5HY92 759 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 HGSNATQ68CP4 663 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 NCBP2-AS2Q69YL0 99 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 TIGD7Q6NT04 549 aaPredicted RBP12.98□□□□□ -0.33
TPM1-220ENST00000559556 CEACAM20Q6UY09 585 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 BTBD6Q96KE9 485 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 TSGA13Q96PP4 275 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 WDR24Q96S15 920 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 ZPBPQ9BS86 351 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 THAP2Q9H0W7 228 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 FBXO8Q9NRD0 319 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 TBC1D29Q9UFV1 150 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 CNOT6Q9ULM6 557 aaKnown RBP12.98□□□□□ -0.33
TPM1-220ENST00000559556 RPL26L1Q9UNX3 145 aaKnown RBP12.98□□□□□ -0.33
TPM1-220ENST00000559556 CHKBQ9Y259 395 aa12.98□□□□□ -0.33
TPM1-220ENST00000559556 TMEM184BQ9Y519 407 aaPredicted RBP12.98□□□□□ -0.33
TPM1-220ENST00000559556 MN1Q10571 1320 aaPredicted RBP12.97□□□□□ -0.33
TPM1-220ENST00000559556 FADS2P1A8MWK0 482 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 MATN3O15232 486 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 CLDN7O95471 211 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 ASMTLO95671 621 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 ATP1A1P05023 1023 aaKnown RBP12.97□□□□□ -0.33
TPM1-220ENST00000559556 CYP1A2P05177 515 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 F3P13726 295 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 SLC2A4P14672 509 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 CCNCP24863 283 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 CCR10P46092 362 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 ITKQ08881 620 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 IFI16Q16666 785 aaKnown RBP12.97□□□□□ -0.33
TPM1-220ENST00000559556 TDRD12Q587J7 1177 aaKnown RBP12.97□□□□□ -0.33
TPM1-220ENST00000559556 IYDQ6PHW0 289 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 CHST15Q7LFX5 561 aaPredicted RBP12.97□□□□□ -0.33
TPM1-220ENST00000559556 NLGN4XQ8N0W4 816 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 NLGN4YQ8NFZ3 816 aaPredicted RBP12.97□□□□□ -0.33
TPM1-220ENST00000559556 ARRDC2Q8TBH0 407 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 HERPUD2Q9BSE4 406 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 NUP85Q9BW27 656 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 EPB41L1Q9H4G0 881 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 STN1Q9H668 368 aaKnown RBP12.97□□□□□ -0.33
TPM1-220ENST00000559556 RMI1Q9H9A7 625 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 PCDH9Q9HC56 1237 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 HAUS2Q9NVX0 235 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 ZNHIT2Q9UHR6 403 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 BZW2Q9Y6E2 419 aaKnown RBP12.97□□□□□ -0.33
TPM1-220ENST00000559556 CELSR2Q9HCU4 2923 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 MYO9AB2RTY4 2548 aa12.97□□□□□ -0.33
TPM1-220ENST00000559556 DIDO1Q9BTC0 2240 aaKnown RBP12.96□□□□□ -0.33
TPM1-220ENST00000559556 TRBV23OR9-2A0A075B6M9 112 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 KIR2DS5A0A0G2JLQ3 304 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 A0A0G2JNG1 304 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 C1orf232A0A0U1RR37 186 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms