RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 H0YGN5 161 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 H3BQ06 376 aaPredicted RBP4.43□□□□□ -1.7
CASC4-206ENST00000558847 M0QZ24 198 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 SOCS2O14508 198 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 HS3ST1O14792 307 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 SPINT2O43291 252 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 AFPP02771 609 aaKnown RBP4.43□□□□□ -1.7
CASC4-206ENST00000558847 IGKV2-30P06310 120 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 QDPRP09417 244 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 PRF1P14222 555 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 GJA1P17302 382 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 TRIM21P19474 475 aaKnown RBP4.43□□□□□ -1.7
CASC4-206ENST00000558847 PSMC6P62333 389 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 FOXM1Q08050 763 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 GRAPQ13588 217 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 MYLK3Q32MK0 819 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 Q6ZTK2 550 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 CHST3Q7LGC8 479 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 ZNF367Q7RTV3 350 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 CCDC186Q7Z3E2 898 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 ANKRD23Q86SG2 305 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 GUF1Q8N442 669 aaKnown RBP4.43□□□□□ -1.7
CASC4-206ENST00000558847 NKAIN3Q8N8D7 197 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 MIGA1Q8NAN2 632 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 OR1J2Q8NGS2 313 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 TMCO6Q96DC7 493 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 PGAP3Q96FM1 320 aaPredicted RBP4.43□□□□□ -1.7
CASC4-206ENST00000558847 DGAT2Q96PD7 388 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 FCRL4Q96PJ5 515 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 PAFAH2Q99487 392 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 KXD1Q9BQD3 176 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 EDEM3Q9BZQ6 932 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 SPRTNQ9H040 489 aaPredicted RBP4.43□□□□□ -1.7
CASC4-206ENST00000558847 PLAC1Q9HBJ0 212 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 CNGB3Q9NQW8 809 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 MTMR10Q9NXD2 777 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 DNAJB4Q9UDY4 337 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 GIMAP2Q9UG22 337 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 IL17BQ9UHF5 180 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 CDC14AQ9UNH5 594 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 TRPV2Q9Y5S1 764 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 CPED1A4D0V7 1026 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 EIF4E1BA6NMX2 242 aaKnown RBP4.42□□□□□ -1.7
CASC4-206ENST00000558847 A8MXE2 369 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 HSPA12AO43301 675 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 MOSPD3O75425 235 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 GAGE7O76087 117 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 TUBBP07437 444 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 CYC1P08574 325 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 GAGE12FP0CL80 117 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 GAGE12GP0CL81 117 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 GAGE12IP0CL82 117 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 MMP9P14780 707 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 PIGAP37287 484 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 THPOP40225 353 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 RFX2P48378 723 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 RAD23AP54725 363 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 SIRPAP78324 504 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 DSC1Q08554 894 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 GAGE1Q13065 139 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 GAGE4Q13068 117 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 SNTB1Q13884 538 aaKnown RBP4.42□□□□□ -1.7
CASC4-206ENST00000558847 CTTNQ14247 550 aaKnown RBP4.42□□□□□ -1.7
CASC4-206ENST00000558847 MYBPC2Q14324 1141 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 CRY2Q49AN0 593 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 NUGGCQ68CJ6 796 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 ANKRD54Q6NXT1 300 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 FAM122CQ6P4D5 195 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 Q6ZSV7 163 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 SDCCAG8Q86SQ7 713 aaPredicted RBP4.42□□□□□ -1.7
CASC4-206ENST00000558847 CCDC190Q86UF4 302 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 ZC3HC1Q86WB0 502 aaKnown RBP4.42□□□□□ -1.7
CASC4-206ENST00000558847 PTPMT1Q8WUK0 201 aaPredicted RBP4.42□□□□□ -1.7
CASC4-206ENST00000558847 EGLN2Q96KS0 407 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 CFAP57Q96MR6 1250 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 ZMAT2Q96NC0 199 aaKnown RBP4.42□□□□□ -1.7
CASC4-206ENST00000558847 ABHD1Q96SE0 405 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 GAD1Q99259 594 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 CCDC106Q9BWC9 280 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 SPATC1LQ9H0A9 340 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 RBM38Q9H0Z9 239 aaKnown RBP4.42□□□□□ -1.7
CASC4-206ENST00000558847 PFDN4Q9NQP4 134 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 SH3GLB2Q9NR46 395 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 PLAGL1Q9UM63 463 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 NOL7Q9UMY1 257 aaKnown RBP4.42□□□□□ -1.7
CASC4-206ENST00000558847 CCL27Q9Y4X3 112 aa4.42□□□□□ -1.7
CASC4-206ENST00000558847 LOC102723996A0A087X1L8 192 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 GPR75-ASB3A0A0A6YYF3 556 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 LY6G6EA0A0G2JKS1 128 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 TRBC2A0A5B9 178 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 OR6C75A6NL08 312 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 H0YIN7 160 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 ADAMDEC1O15204 470 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 ZIC3O60481 467 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 GGPS1O95749 300 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 CH25HO95992 272 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 EGFP01133 1207 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 ICAM1P05362 532 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 CCDC175P0C221 793 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 HOXD3P31249 432 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms