RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 PNPLA1Q8N8W4 532 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 LRRC57Q8N9N7 239 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 FAM46DQ8NEK8 389 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 ACTL9Q8TC94 416 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 IFI44Q8TCB0 444 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 ZCCHC14Q8WYQ9 949 aaKnown RBP8.62□□□□□ -1.03
USP3-208ENST00000558285 TSACCQ96A04 125 aaPredicted RBP8.62□□□□□ -1.03
USP3-208ENST00000558285 SH3KBP1Q96B97 665 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 PLEKHG4BQ96PX9 1271 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 OR2M4Q96R27 311 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 DPYSL5Q9BPU6 564 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 DESI2Q9BSY9 194 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 BOCQ9BWV1 1114 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 SPATA16Q9BXB7 569 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 NRSN2Q9GZP1 204 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 LACRTQ9GZZ8 138 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 ABCG8Q9H221 673 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 GBA3Q9H227 469 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 UCKL1Q9NWZ5 548 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 NFKBIL1Q9UBC1 381 aaPredicted RBP8.62□□□□□ -1.03
USP3-208ENST00000558285 ZNF711Q9Y462 761 aa8.62□□□□□ -1.03
USP3-208ENST00000558285 USP34Q70CQ2 3546 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 EME2A4GXA9 379 aaPredicted RBP8.61□□□□□ -1.03
USP3-208ENST00000558285 TTC36A6NLP5 189 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 OR5K4A6NMS3 321 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 ERI2A8K979 691 aaKnown RBP8.61□□□□□ -1.03
USP3-208ENST00000558285 RHPN2P1A8MT19 583 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 YY2O15391 372 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 OPA1O60313 960 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 KCNJ13O60928 360 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 PDHA1P08559 390 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 RALBP11234 206 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 PECAM1P16284 738 aaPredicted RBP8.61□□□□□ -1.03
USP3-208ENST00000558285 NFKB1P19838 968 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 LHCGRP22888 699 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 GNPDA1P46926 289 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 PPM1FP49593 454 aaPredicted RBP8.61□□□□□ -1.03
USP3-208ENST00000558285 WNT3AP56704 352 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 SEMG2Q02383 582 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 NIPAL4Q0D2K0 466 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 DNAJC3Q13217 504 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 EIF3IQ13347 325 aaKnown RBP8.61□□□□□ -1.03
USP3-208ENST00000558285 SPIDRQ14159 915 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 GALNT3Q14435 633 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 GLT6D1Q7Z4J2 308 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 RBFAQ8N0V3 343 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 TRAM1L1Q8N609 369 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 CNTD1Q8N815 330 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 IPMKQ8NFU5 416 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 DTX3LQ8TDB6 740 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 HEXDCQ8WVB3 486 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 KRT35Q92764 455 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 TMEM159Q96B96 161 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 SPATA13Q96N96 652 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 CNTNAP3BQ96NU0 1288 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 NAP1L3Q99457 506 aaPredicted RBP8.61□□□□□ -1.03
USP3-208ENST00000558285 TTC1Q99614 292 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 C19orf43Q9BQ61 176 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 PLCD4Q9BRC7 762 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 RIOK2Q9BVS4 552 aaKnown RBP8.61□□□□□ -1.03
USP3-208ENST00000558285 CNTNAP3Q9BZ76 1288 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 CARD9Q9H257 536 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 GOLPH3Q9H4A6 298 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 KLK13Q9UKR3 277 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 SLC17A4Q9Y2C5 497 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 GPSM3Q9Y4H4 160 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 MRFAP1Q9Y605 127 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 ADGRG1Q9Y653 693 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 AK5Q9Y6K8 562 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 NCOR2Q9Y618 2525 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 CABIN1Q9Y6J0 2220 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 MYO15AQ9UKN7 3530 aa8.61□□□□□ -1.03
USP3-208ENST00000558285 ANKRD33BA6NCL7 494 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 C5orf60A6NFR6 353 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 PCNX2A6NKB5 2137 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 E7EVH7 732 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 H0YHG0 523 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 H3BQF6 201 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 CHUKO15111 745 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 STX7O15400 261 aaKnown RBP8.6□□□□□ -1.03
USP3-208ENST00000558285 RRP8O43159 456 aaKnown RBP8.6□□□□□ -1.03
USP3-208ENST00000558285 VEGFDO43915 354 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 URI1O94763 535 aaPredicted RBP8.6□□□□□ -1.03
USP3-208ENST00000558285 SEC31AO94979 1220 aaKnown RBP8.6□□□□□ -1.03
USP3-208ENST00000558285 SLC25A14O95258 325 aaPredicted RBP8.6□□□□□ -1.03
USP3-208ENST00000558285 CLDN7O95471 211 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 FTCDO95954 541 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 MT-CO3P00414 261 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 PYGMP11217 842 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 GLB1P16278 677 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 MCM3P25205 808 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 HNRNPH1P31943 449 aaKnown RBP8.6□□□□□ -1.03
USP3-208ENST00000558285 HMGCLP35914 325 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 HADHAP40939 763 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 SARNPP82979 210 aaKnown RBP8.6□□□□□ -1.03
USP3-208ENST00000558285 PTSQ03393 145 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 C1orf61Q13536 156 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 CDKN3Q16667 212 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 PARP6Q2NL67 630 aa8.6□□□□□ -1.03
USP3-208ENST00000558285 MAP9Q49MG5 647 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms