RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CFAP69A5D8W1 941 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 A8MX80 341 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 H7C0C1 242 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 CACNB4O00305 520 aaPredicted RBP16.58■□□□□ 0.24
NEK9-211ENST00000557673 FANCGO15287 622 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 ZW10O43264 779 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 JCHAINP01591 159 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 RBP3P10745 1247 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 HGFP14210 728 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 PTPN3P26045 913 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 CD82P27701 267 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 ATP5OP48047 213 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 ZFP36L1Q07352 338 aaKnown RBP16.58■□□□□ 0.24
NEK9-211ENST00000557673 WASHC5Q12768 1159 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 TRAF2Q12933 501 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 ARHGEF7Q14155 803 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 SIX1Q15475 284 aaPredicted RBP16.58■□□□□ 0.24
NEK9-211ENST00000557673 TCEA2Q15560 299 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 LINC00303Q3SY05 128 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 CERCAMQ5T4B2 595 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 TMEM164Q5U3C3 297 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 ATG14Q6ZNE5 492 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 TAF8Q7Z7C8 310 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 CNTD1Q8N815 330 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 Q8N9G6 341 aaPredicted RBP16.58■□□□□ 0.24
NEK9-211ENST00000557673 SLC35B2Q8TB61 432 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 PDCD6IPQ8WUM4 868 aaKnown RBP16.58■□□□□ 0.24
NEK9-211ENST00000557673 ATG4AQ8WYN0 398 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 EXTL1Q92935 676 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 B3GNT4Q9C0J1 378 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 STARD5Q9NSY2 213 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 SNX12Q9UMY4 172 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 TTLL3Q9Y4R7 772 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 HECTD1Q9ULT8 2610 aa16.58■□□□□ 0.24
NEK9-211ENST00000557673 TNFRSF10CO14798 259 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 HTRA2O43464 458 aaPredicted RBP16.57■□□□□ 0.24
NEK9-211ENST00000557673 CEP104O60308 925 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 SOCS5O75159 536 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 FGGP02679 453 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 PCCBP05166 539 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 POLR2LP62875 67 aaKnown RBP16.57■□□□□ 0.24
NEK9-211ENST00000557673 DSC2Q02487 901 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 TGIF1Q15583 401 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 OGFOD3Q6PK18 319 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 LIPIQ6XZB0 460 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 DPPA4Q7L190 304 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 FAM46DQ8NEK8 389 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 OR56A4Q8NGH8 313 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 HTR3CQ8WXA8 447 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 OSBPL9Q96SU4 736 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 NAPGQ99747 312 aaPredicted RBP16.57■□□□□ 0.24
NEK9-211ENST00000557673 SEMA3CQ99985 751 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 FRMD8P1Q9BZ68 369 aaPredicted RBP16.57■□□□□ 0.24
NEK9-211ENST00000557673 B4GALT6Q9UBX8 382 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 ZKSCAN5Q9Y2L8 839 aa16.57■□□□□ 0.24
NEK9-211ENST00000557673 PDE2AO00408 941 aaPredicted RBP16.56■□□□□ 0.24
NEK9-211ENST00000557673 CES2O00748 559 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 NUDT21O43809 227 aaKnown RBP16.56■□□□□ 0.24
NEK9-211ENST00000557673 ZNF189O75820 626 aaPredicted RBP16.56■□□□□ 0.24
NEK9-211ENST00000557673 RECQL5O94762 991 aaPredicted RBP16.56■□□□□ 0.24
NEK9-211ENST00000557673 CPP00450 1065 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 HOXC4P09017 264 aaPredicted RBP16.56■□□□□ 0.24
NEK9-211ENST00000557673 ELFN1P0C7U0 828 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 RBL1P28749 1068 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 KIAA1024LP59773 190 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 C14orf28Q4W4Y0 310 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 TEX44Q53QW1 395 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 FAM182AQ5T1J6 154 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 NYAP1Q6ZVC0 841 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 SPRED1Q7Z699 444 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 RASGEF1CQ8N431 466 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 PLA2G15Q8NCC3 412 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 ARRDC2Q8TBH0 407 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 COG1Q8WTW3 980 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 TRIM44Q96DX7 344 aaPredicted RBP16.56■□□□□ 0.24
NEK9-211ENST00000557673 PBKQ96KB5 322 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 TEKT5Q96M29 485 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 AGAP3Q96P47 875 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 VAT1Q99536 393 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 C10orf88Q9H8K7 445 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 LRIT1Q9P2V4 623 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 DNPEPQ9ULA0 475 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 LRP4O75096 1905 aa16.56■□□□□ 0.24
NEK9-211ENST00000557673 PRAMEF33A0A0G2JMD5 474 aa16.55■□□□□ 0.24
NEK9-211ENST00000557673 LIASO43766 372 aa16.55■□□□□ 0.24
NEK9-211ENST00000557673 PRAMEF10O60809 474 aa16.55■□□□□ 0.24
NEK9-211ENST00000557673 GM2AP17900 193 aa16.55■□□□□ 0.24
NEK9-211ENST00000557673 ITKQ08881 620 aa16.55■□□□□ 0.24
NEK9-211ENST00000557673 NIPAL4Q0D2K0 466 aa16.55■□□□□ 0.24
NEK9-211ENST00000557673 IHHQ14623 411 aa16.55■□□□□ 0.24
NEK9-211ENST00000557673 OASLQ15646 514 aaKnown RBP16.55■□□□□ 0.24
NEK9-211ENST00000557673 DARS2Q6PI48 645 aaKnown RBP16.55■□□□□ 0.24
NEK9-211ENST00000557673 PIM3Q86V86 326 aa16.55■□□□□ 0.24
NEK9-211ENST00000557673 ZNF567Q8N184 647 aa16.55■□□□□ 0.24
NEK9-211ENST00000557673 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.55■□□□□ 0.24
NEK9-211ENST00000557673 MAIP1Q8WWC4 291 aa16.55■□□□□ 0.24
NEK9-211ENST00000557673 SPOCK2Q92563 424 aa16.55■□□□□ 0.24
NEK9-211ENST00000557673 USP7Q93009 1102 aa16.55■□□□□ 0.24
NEK9-211ENST00000557673 PDXPQ96GD0 296 aa16.55■□□□□ 0.24
NEK9-211ENST00000557673 DPEP2Q9H4A9 486 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms