RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 FUZQ9BT04 418 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.99□□□□□ -1.77
VRK1-207ENST00000557352 CEPT1Q9Y6K0 416 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 UTYO14607 1347 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 PTPRCP08575 1304 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 IGKV3D-15A0A087WSY6 115 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 ZNHIT1O43257 154 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 IFIT1P09914 478 aaKnown RBP3.98□□□□□ -1.77
VRK1-207ENST00000557352 PATE4P0C8F1 98 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 DCTP40126 519 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 HALP42357 657 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 GNAQP50148 359 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 FOXM1Q08050 763 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 FOXD4Q12950 439 aaPredicted RBP3.98□□□□□ -1.77
VRK1-207ENST00000557352 CAMK1Q14012 370 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 SLC9B1Q4ZJI4 515 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 FRG2Q64ET8 278 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 TTI2Q6NXR4 508 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 SLC27A1Q6PCB7 646 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 PQLC2Q6ZP29 291 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 LRRTM4Q86VH4 590 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 BEST3Q8N1M1 668 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 OR5R1Q8NH85 324 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 TRIM63Q969Q1 353 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 GRAMD2BQ96HH9 432 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 QRFPRQ96P65 431 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 NEURL2Q9BR09 285 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 MOV10L1Q9BXT6 1211 aaKnown RBP3.98□□□□□ -1.77
VRK1-207ENST00000557352 IFIH1Q9BYX4 1025 aaKnown RBP3.98□□□□□ -1.77
VRK1-207ENST00000557352 GPR63Q9BZJ6 419 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 PADI3Q9ULW8 664 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 EPRSP07814 1512 aaKnown RBP3.98□□□□□ -1.77
VRK1-207ENST00000557352 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.98□□□□□ -1.77
VRK1-207ENST00000557352 CDC42BPAQ5VT25 1732 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 UHRF1BP1LA0JNW5 1464 aa3.98□□□□□ -1.77
VRK1-207ENST00000557352 RRBP1Q9P2E9 1410 aaKnown RBP3.97□□□□□ -1.77
VRK1-207ENST00000557352 EIF3FO00303 357 aaPredicted RBP3.97□□□□□ -1.77
VRK1-207ENST00000557352 TNPO2O14787 897 aaKnown RBP3.97□□□□□ -1.77
VRK1-207ENST00000557352 LDLRAD4O15165 306 aa3.97□□□□□ -1.77
VRK1-207ENST00000557352 EGFP01133 1207 aa3.97□□□□□ -1.77
VRK1-207ENST00000557352 IGHV4-39P01824 125 aa3.97□□□□□ -1.77
VRK1-207ENST00000557352 INHBAP08476 426 aa3.97□□□□□ -1.77
VRK1-207ENST00000557352 GGT5P36269 586 aa3.97□□□□□ -1.77
VRK1-207ENST00000557352 FASLGP48023 281 aa3.97□□□□□ -1.77
VRK1-207ENST00000557352 RPL24P83731 157 aaKnown RBP3.97□□□□□ -1.77
VRK1-207ENST00000557352 TMEM35AQ53FP2 167 aa3.97□□□□□ -1.77
VRK1-207ENST00000557352 ZNF772Q68DY9 489 aaPredicted RBP3.97□□□□□ -1.77
VRK1-207ENST00000557352 OR7E24Q6IFN5 339 aa3.97□□□□□ -1.77
VRK1-207ENST00000557352 CADM4Q8NFZ8 388 aa3.97□□□□□ -1.77
VRK1-207ENST00000557352 SCRN2Q96FV2 425 aa3.97□□□□□ -1.77
VRK1-207ENST00000557352 ZNF354BQ96LW1 612 aa3.97□□□□□ -1.77
VRK1-207ENST00000557352 SEBOXQ9HB31 216 aaPredicted RBP3.97□□□□□ -1.77
VRK1-207ENST00000557352 PPP1R14DQ9NXH3 145 aa3.97□□□□□ -1.77
VRK1-207ENST00000557352 NUP153P49790 1475 aaKnown RBP3.97□□□□□ -1.77
VRK1-207ENST00000557352 ABCC2Q92887 1545 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 MYO5CQ9NQX4 1742 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 IGLV5-45A0A087WSX0 123 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 USP17L23D6RBM5 183 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 BLOC1S5-TXNDC5H3BN57 136 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 SPINT2O43291 252 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 SYNGR3O43761 229 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 PCDH7O60245 1069 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 HOXB5P09067 269 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 FAM106CPP0CH98 169 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 POLR2CP19387 275 aaPredicted RBP3.96□□□□□ -1.78
VRK1-207ENST00000557352 TAS2R38P59533 333 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 SFMBT2Q5VUG0 894 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 NAA35Q5VZE5 725 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 SIGIRRQ6IA17 410 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 ATF7IPQ6VMQ6 1270 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 RAD9BQ6WBX8 426 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 ANKRD18AQ8IVF6 992 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 ACVR1CQ8NER5 493 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 OR52I2Q8NH67 350 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 LINGO1Q96FE5 620 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 MAELQ96JY0 434 aaKnown RBP3.96□□□□□ -1.78
VRK1-207ENST00000557352 HERPUD2Q9BSE4 406 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 UPF2Q9HAU5 1272 aaKnown RBP3.96□□□□□ -1.78
VRK1-207ENST00000557352 MPP6Q9NZW5 540 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 CROCC2H7BZ55 1655 aa3.96□□□□□ -1.78
VRK1-207ENST00000557352 GCC2Q8IWJ2 1684 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 ADGBQ8N7X0 1667 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 ZCWPW2A0A1B0GU75 182 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 A0A1B0GVY2 172 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 A0A1W2PQM1 296 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 SMIM1B2RUZ4 78 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 VCYO14598 125 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 PRKNO60260 465 aaPredicted RBP3.95□□□□□ -1.78
VRK1-207ENST00000557352 SEC31AO94979 1220 aaKnown RBP3.95□□□□□ -1.78
VRK1-207ENST00000557352 CDAP32320 146 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 AMPHP49418 695 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 RPP30P78346 268 aaKnown RBP3.95□□□□□ -1.78
VRK1-207ENST00000557352 FGFBP1Q14512 234 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 COL28A1Q2UY09 1125 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 USP41Q3LFD5 358 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 C6orf141Q5SZD1 244 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 NRROSQ86YC3 692 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 ADAD2Q8NCV1 583 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms