RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	ACTR1A	P61163	376 aa		11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	SLC10A2	Q12908	348 aa	Predicted RBP	11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	USP45	Q70EL2	814 aa		11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	MARK2	Q7KZI7	788 aa	Known RBP	11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ZNF765	Q7L2R6	523 aa		11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ZNF761	Q86XN6	746 aa	Predicted RBP	11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	SFRP1	Q8N474	314 aa		11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	PQLC3	Q8N755	202 aa		11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	SLC37A2	Q8TED4	501 aa		11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	FATE1	Q969F0	183 aa		11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	EID2B	Q96D98	161 aa		11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	TSGA13	Q96PP4	275 aa		11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	OR2M4	Q96R27	311 aa		11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	RIOK2	Q9BVS4	552 aa	Known RBP	11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	NUP85	Q9BW27	656 aa		11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	TDRD1	Q9BXT4	1180 aa	Known RBP	11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ANAPC7	Q9UJX3	599 aa		11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	CHKB	Q9Y259	395 aa		11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	PRKAB1	Q9Y478	270 aa		11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	B3GALT1	Q9Y5Z6	326 aa		11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	UTP20	O75691	2785 aa	Known RBP	11.09	□□□□□ -0.63
HNRNPC-231	ENST00000557336	GOLGA6C	A6NDK9	693 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	GOLGA6B	A6NDN3	693 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	SMTNL1	A8MU46	457 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	FADS2P1	A8MWK0	482 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	MATN3	O15232	486 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	SUV39H1	O43463	412 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	CLDN7	O95471	211 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	ATP1A1	P05023	1023 aa	Known RBP	11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	GOLGA6D	P0CG33	693 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	CD82	P27701	267 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	UGT1A3	P35503	534 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	TAS2R40	P59535	323 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	GBE1	Q04446	702 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.08	□□□□□ -0.64	3e-8	■■□□□ 11.5
HNRNPC-231	ENST00000557336	TUSC1	Q2TAM9	212 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	FILIP1L	Q4L180	1135 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	XKR5	Q6UX68	686 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	LRRC49	Q8IUZ0	686 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	CNTD1	Q8N815	330 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	SYN2	Q92777	582 aa	Predicted RBP	11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	ART4	Q93070	314 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	FAF2	Q96CS3	445 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	TAAR9	Q96RI9	348 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	LYSMD1	Q96S90	227 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	TRIM4	Q9C037	500 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	POLR1E	Q9GZS1	481 aa	Known RBP	11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	NAT10	Q9H0A0	1025 aa	Known RBP	11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	CLMP	Q9H6B4	373 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	GOLGA6A	Q9NYA3	693 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	SEPT10	Q9P0V9	454 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	TBC1D29	Q9UFV1	150 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	IP6K2	Q9UHH9	426 aa		11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336	USP9X	Q93008	2570 aa	Predicted RBP	11.08	□□□□□ -0.64
HNRNPC-231	ENST00000557336		A0A1W2PQJ5	194 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336		B4E171	279 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	STMND1	H3BQB6	276 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	INPP4B	O15327	924 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	HLA-DQB2	P05538	268 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	LIF	P15018	202 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	ZNF30	P17039	623 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	SERPINB6	P35237	376 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	TSPAN7	P41732	249 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	ANKRD20A8P	Q5CZ79	823 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	HENMT1	Q5T8I9	393 aa	Known RBP	11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	TMEM71	Q6P5X7	295 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	ARHGAP22	Q7Z5H3	698 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	NRSN1	Q8IZ57	195 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	BBS5	Q8N3I7	341 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	AGBL5	Q8NDL9	886 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	EXD1	Q8NHP7	514 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	COL26A1	Q96A83	441 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	DDA1	Q9BW61	102 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	CDH19	Q9H159	772 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	RBM22	Q9NW64	420 aa	Known RBP eCLIP	11.07	□□□□□ -0.64	4e-42	■■■■■ 28.1
HNRNPC-231	ENST00000557336	KCNK4	Q9NYG8	393 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	DTL	Q9NZJ0	730 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	PILRA	Q9UKJ1	303 aa		11.07	□□□□□ -0.64
HNRNPC-231	ENST00000557336	PRRC2C	Q9Y520	2896 aa	Known RBP	11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	USP9Y	O00507	2555 aa	Predicted RBP	11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	GYPC	P04921	128 aa		11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	SERPING1	P05155	500 aa		11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	CCNC	P24863	283 aa		11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	NFKBIA	P25963	317 aa		11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	SPINT3	P49223	89 aa		11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	GPLD1	P80108	840 aa		11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	FANCC	Q00597	558 aa		11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	ITK	Q08881	620 aa		11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	KRT81	Q14533	505 aa		11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	TDRD12	Q587J7	1177 aa	Known RBP	11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	TMEM164	Q5U3C3	297 aa		11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	ANKS6	Q68DC2	871 aa		11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	ALKBH5	Q6P6C2	394 aa	Known RBP	11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	IYD	Q6PHW0	289 aa		11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	TIPARP	Q7Z3E1	657 aa	Known RBP	11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	PRICKLE2	Q7Z3G6	844 aa		11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	NSMCE1	Q8WV22	266 aa		11.06	□□□□□ -0.64
HNRNPC-231	ENST00000557336	PACSIN1	Q9BY11	444 aa		11.06	□□□□□ -0.64

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