RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 FANCEQ9HB96 536 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 ATP13A1Q9HD20 1204 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 LTB4R2Q9NPC1 389 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 TBCCD1Q9NVR7 557 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 PKD2L2Q9NZM6 624 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 ANAPC2Q9UJX6 822 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 IKZF3Q9UKT9 509 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 FAM50BQ9Y247 325 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 CORINQ9Y5Q5 1042 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 GPR45Q9Y5Y3 372 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 A0A1W2PP18 115 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 MROH6A6NGR9 719 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 SUPT3HB4E1H0 165 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 LDB2O43679 373 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 SNAP91O60641 907 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 CNTN5O94779 1100 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 KCNH1O95259 989 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 MATN4O95460 622 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 FDXRP22570 491 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 MAP4P27816 1152 aaKnown RBP11.34□□□□□ -0.59
SRP54-213ENST00000556994 PCSK1P29120 753 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 HOXC13P31276 330 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 CYP2C18P33260 490 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 AGTR2P50052 363 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 BMXP51813 675 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 CRYBB1P53674 252 aaPredicted RBP11.34□□□□□ -0.59
SRP54-213ENST00000556994 KCNK10P57789 538 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 ADAM17P78536 824 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 NFKB2Q00653 900 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 PLIN5Q00G26 463 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 GNA12Q03113 381 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 CLCQ05315 142 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 MARC1Q5VT66 337 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 GPR142Q7Z601 462 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 ITIH5Q86UX2 942 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 BPIFB6Q8NFQ5 453 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 GABPB2Q8TAK5 448 aaPredicted RBP11.34□□□□□ -0.59
SRP54-213ENST00000556994 ZNF420Q8TAQ5 688 aaPredicted RBP11.34□□□□□ -0.59
SRP54-213ENST00000556994 BORCS5Q969J3 196 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 ACOX2Q99424 681 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 CHID1Q9BWS9 393 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 ABHD16BQ9H3Z7 469 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 NMUR1Q9HB89 426 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 CD320Q9NPF0 282 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 PLXNB2O15031 1838 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 UBA6A0AVT1 1052 aaPredicted RBP11.33□□□□□ -0.6
SRP54-213ENST00000556994 ARL5CA6NH57 179 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 H0Y858 1186 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 PDHXO00330 501 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 ENPP3O14638 875 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 CD3EAPO15446 510 aaKnown RBP11.33□□□□□ -0.6
SRP54-213ENST00000556994 GLP2RO95838 553 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 LDLRP01130 860 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 CYBBP04839 570 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 MYL3P08590 195 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 INHBBP09529 407 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 OCM2P0CE71 109 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 OCMP0CE72 109 aaPredicted RBP11.33□□□□□ -0.6
SRP54-213ENST00000556994 IDO1P14902 403 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 ZNF37AP17032 561 aaPredicted RBP11.33□□□□□ -0.6
SRP54-213ENST00000556994 NR4A1P22736 598 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 MAGEA10P43363 369 aaPredicted RBP11.33□□□□□ -0.6
SRP54-213ENST00000556994 ZFP36L2P47974 494 aaKnown RBP11.33□□□□□ -0.6
SRP54-213ENST00000556994 OR4D2P58180 307 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 NFATC3Q12968 1075 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 FSCN1Q16658 493 aaKnown RBP11.33□□□□□ -0.6
SRP54-213ENST00000556994 TIGD2Q4W5G0 525 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 ALFQ53S48 1182 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 BRMS1LQ5PSV4 323 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 PIK3R6Q5UE93 754 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 SDHAF4Q5VUM1 108 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 AFMIDQ63HM1 303 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 IQSEC1Q6DN90 963 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 FAM117BQ6P1L5 589 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 DCDC5Q6ZRR9 648 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 DDHD1Q8NEL9 900 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 NLGN2Q8NFZ4 835 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 OR10T2Q8NGX3 314 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 ACDQ96AP0 544 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 COX4I2Q96KJ9 171 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 TSPAN18Q96SJ8 248 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 ATOH8Q96SQ7 321 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 NANOGQ9H9S0 305 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 TLR9Q9NR96 1032 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 ADARB2Q9NS39 739 aaKnown RBP11.33□□□□□ -0.6
SRP54-213ENST00000556994 ABCC13Q9NSE7 274 aa11.33□□□□□ -0.6
SRP54-213ENST00000556994 CCDC162PA2VCL2 907 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 CCDC154A6NI56 674 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 F8W810 466 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 K7EPI3 171 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 B3GAT3O94766 335 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 C1RP00736 705 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 POMCP01189 267 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 FUCA1P04066 466 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 FAM163BP0C2L3 166 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 TCF3P15923 654 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 HRH2P25021 359 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 SHMT2P34897 504 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 GRIK1P39086 918 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 CD97P48960 835 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms