RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 SH3KBP1Q96B97 665 aa8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 ZNF599Q96NL3 588 aa8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 AGPAT1Q99943 283 aa8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 MGME1Q9BQP7 344 aa8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 TBC1D10AQ9BXI6 508 aa8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 STN1Q9H668 368 aaKnown RBP8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 SIDT1Q9NXL6 827 aaKnown RBP8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 CWC15Q9P013 229 aaKnown RBP8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 ZNHIT2Q9UHR6 403 aa8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 DACH1Q9UI36 760 aa8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 METRNQ9UJH8 293 aa8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 TLK1Q9UKI8 766 aa8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 VPS4AQ9UN37 437 aa8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 POLHQ9Y253 713 aa8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 KCNK6Q9Y257 313 aa8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 TEP1Q99973 2627 aaKnown RBP8.95□□□□□ -0.98
HNRNPC-227ENST00000556897 HIVEP3Q5T1R4 2406 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 CENPEQ02224 2701 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 CDC14CA4D256 554 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 A6NCN8 305 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 PRPSAP2O60256 369 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 SNX2O60749 519 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 DNAJC6O75061 913 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 KATNA1O75449 491 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 RFPL1O75677 317 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 DNAJB5O75953 348 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 PDHA1P08559 390 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 ANKRD34CP0C6C1 535 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 RNF224P0DH78 156 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 ACP5P13686 325 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 MIPP30301 263 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 PMS2P54278 862 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 GFERP55789 205 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 SH3BP2P78314 561 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 PTSQ03393 145 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 BECN1Q14457 450 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 KRT31Q15323 416 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 FKBP15Q5T1M5 1219 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 ACAD10Q6JQN1 1059 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 C6orf15Q6UXA7 325 aaPredicted RBP8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 CYP4V2Q6ZWL3 525 aaPredicted RBP8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 SLC9B2Q86UD5 537 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 PLXDC1Q8IUK5 500 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 GALNT11Q8NCW6 608 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 EXD1Q8NHP7 514 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 COX14Q96I36 57 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 ELMO2Q96JJ3 720 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 PCMTD1Q96MG8 357 aaPredicted RBP8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 HERPUD2Q9BSE4 406 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 RIOK2Q9BVS4 552 aaKnown RBP8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 TAS2R14Q9NYV8 317 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 CPNE7Q9UBL6 633 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 CNOT8Q9UFF9 292 aaKnown RBP8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 SIK3Q9Y2K2 1263 aa8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 OAS3Q9Y6K5 1087 aaKnown RBP8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 MN1Q10571 1320 aaPredicted RBP8.94□□□□□ -0.98
HNRNPC-227ENST00000556897 A1L4Q6 167 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 PIPSLA2A3N6 862 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 TMCO5BA8MYB1 307 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 MAFKO60675 156 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 SEMA7AO75326 666 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 KIAA0754O94854 1291 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 PYGLP06737 847 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 F3P13726 295 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 AMPD1P23109 780 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 MMP13P45452 471 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 HCAR3P49019 387 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 SEPHS1P49903 392 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 RALGPS1Q5JS13 557 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 MARC1Q5VT66 337 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 TMCO3Q6UWJ1 677 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 ZNF765Q7L2R6 523 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 LYSMD3Q7Z3D4 306 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 NLRP8Q86W28 1048 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 RASGRP3Q8IV61 690 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 BBS5Q8N3I7 341 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 CPT1CQ8TCG5 803 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 SSC4DQ8WTU2 575 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 STAMBPL1Q96FJ0 436 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 C9orf72Q96LT7 481 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 TGM7Q96PF1 710 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 OR6C1Q96RD1 312 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 TRIM7Q9C029 511 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 TWSG1Q9GZX9 223 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 CLSTN2Q9H4D0 955 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 EPB41L1Q9H4G0 881 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 ZWILCHQ9H900 591 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 PARVAQ9NVD7 372 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 ETNK2Q9NVF9 386 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 VPS18Q9P253 973 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 LNPEPQ9UIQ6 1025 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 CNOT6Q9ULM6 557 aaKnown RBP8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 PPIL1Q9Y3C6 166 aa8.93□□□□□ -0.98
HNRNPC-227ENST00000556897 SHANK1Q9Y566 2161 aa8.92□□□□□ -0.98
HNRNPC-227ENST00000556897 TNRC6AQ8NDV7 1962 aaKnown RBP8.92□□□□□ -0.98
HNRNPC-227ENST00000556897 KIR2DS5A0A0G2JLQ3 304 aa8.92□□□□□ -0.98
HNRNPC-227ENST00000556897 A0A0G2JNG1 304 aa8.92□□□□□ -0.98
HNRNPC-227ENST00000556897 A0A0J9YYE9 177 aa8.92□□□□□ -0.98
HNRNPC-227ENST00000556897 TMEM191CA6NGB0 347 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms