RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 FBXO48Q5FWF7 155 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 TCEAL5Q5H9L2 206 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 METTL3Q86U44 580 aaKnown RBP18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 POU5F2Q8N7G0 328 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 LEMD2Q8NC56 503 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 RSPRY1Q96DX4 576 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 TUBB6Q9BUF5 446 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 MTG2Q9H4K7 406 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 STN1Q9H668 368 aaKnown RBP18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 TNFRSF12AQ9NP84 129 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 LRRC14BA6NHZ5 514 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 ZNF197O14709 1029 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 SLC26A3P40879 764 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 CACNG1Q06432 222 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 CDKN3Q16667 212 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 CARD16Q5EG05 197 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 ELMSAN1Q6PJG2 1045 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 PIWIL4Q7Z3Z4 852 aaKnown RBP18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 ZFYVE19Q96K21 471 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 RAB3IPQ96QF0 476 aaPredicted RBP18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 BTBD10Q9BSF8 475 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 BOCQ9BWV1 1114 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 SUV39H2Q9H5I1 410 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 ASB8Q9H765 288 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 IL26Q9NPH9 171 aa18.21■□□□□ 0.51
SDR39U1-220ENST00000556548 CAPN8A6NHC0 703 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 GAPDHSO14556 408 aaPredicted RBP18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 HDAC3O15379 428 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 GYG2O15488 501 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 NPHS1O60500 1241 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 SUPT7LO94864 414 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 HOXB8P17481 243 aaPredicted RBP18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 ITGB6P18564 788 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 NAIF1Q69YI7 327 aaPredicted RBP18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 CADM1Q9BY67 442 aaKnown RBP18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 ABCG8Q9H221 673 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 TAS2R1Q9NYW7 299 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 CEP290O15078 2479 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 B2RBV5 119 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 E5RI56 91 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 CDC7O00311 574 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 PFDN6O15212 129 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 DCXO43602 365 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 SIX3O95343 332 aaPredicted RBP18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 BPIP17213 487 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 RPL26P61254 145 aaKnown RBP18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 PFKFB4Q16877 469 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 CRTC1Q6UUV9 634 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 RFLNAQ6ZTI6 216 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 SERPINA9Q86WD7 417 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 PHTF2Q8N3S3 785 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 ZNF366Q8N895 744 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 CNDP1Q96KN2 507 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 CIPCQ9C0C6 399 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 POPDC3Q9HBV1 291 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 TCF7L2Q9NQB0 619 aa18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 DUS2Q9NX74 493 aaKnown RBP18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 RPL26L1Q9UNX3 145 aaKnown RBP18.2■□□□□ 0.5
SDR39U1-220ENST00000556548 KLHL33A6NCF5 533 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 NCF1BA6NI72 391 aaPredicted RBP18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 NCF1CA8MVU1 366 aaPredicted RBP18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 TTC34A8MYJ7 566 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 SMIM24O75264 130 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 VPS26AO75436 327 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 ATP6V1G2O95670 118 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 NCF1P14598 390 aaPredicted RBP18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 POLR2EP19388 210 aaKnown RBP18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 CDH13P55290 713 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 RAD51Q06609 339 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 DHCR24Q15392 516 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 TSNQ15631 228 aaKnown RBP18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 AARS2Q5JTZ9 985 aaKnown RBP18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 FAM91A1Q658Y4 838 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 NXNQ6DKJ4 435 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 PTGR2Q8N8N7 351 aaPredicted RBP18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 KDM1BQ8NB78 822 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 EEF1AKMT1Q8WVE0 214 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 CCDC126Q96EE4 140 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 SYTL2Q9HCH5 934 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 TAGLN3Q9UI15 199 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 TRMT6Q9UJA5 497 aaKnown RBP18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 VPS9D1Q9Y2B5 631 aa18.19■□□□□ 0.5
SDR39U1-220ENST00000556548 NPEPPSL1A6NEC2 478 aa18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 MEI4A8MW99 385 aa18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 F8W8V4 182 aa18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 SKAP2O75563 359 aaPredicted RBP18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 PTGER3P43115 390 aa18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 CHRNA6Q15825 494 aa18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 LRRC66Q68CR7 880 aa18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 CPNE9Q8IYJ1 553 aa18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 CLDN19Q8N6F1 224 aa18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 TEX9Q8N6V9 391 aa18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 GDPD5Q8WTR4 605 aa18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 ISG20Q96AZ6 181 aaKnown RBP18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 ASIC4Q96FT7 647 aa18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 KLHL32Q96NJ5 620 aa18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 IGFLR1Q9H665 355 aa18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 RNF112Q9ULX5 631 aa18.18■□□□□ 0.5
SDR39U1-220ENST00000556548 ERVW-1Q9UQF0 538 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms