RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 GRTP1Q5TC63 336 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 LGSNQ5TDP6 509 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 SEL1L3Q68CR1 1132 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 CERS6Q6ZMG9 384 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 GALNT7Q86SF2 657 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 TRIM69Q86WT6 500 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 TDRPQ86YL5 185 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 DENND6AQ8IWF6 608 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 RIBC1Q8N443 379 aaPredicted RBP10.97□□□□□ -0.65
TMEM260-208ENST00000555905 TRAM1L1Q8N609 369 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 GOLGA6L1Q8N7Z2 621 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 C2CD4AQ8NCU7 369 aaPredicted RBP10.97□□□□□ -0.65
TMEM260-208ENST00000555905 EPS8L3Q8TE67 593 aaKnown RBP10.97□□□□□ -0.65
TMEM260-208ENST00000555905 SCAMP4Q969E2 229 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 TOE1Q96GM8 510 aaKnown RBP10.97□□□□□ -0.65
TMEM260-208ENST00000555905 PKNOX2Q96KN3 472 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 SPACA7Q96KW9 195 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 TCF12Q99081 682 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 C1QTNF2Q9BXJ5 285 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 TPSD1Q9BZJ3 242 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 FAM96AQ9H5X1 160 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 CD93Q9NPY3 652 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 INTS10Q9NVR2 710 aaKnown RBP10.97□□□□□ -0.65
TMEM260-208ENST00000555905 MARCH4Q9P2E8 410 aaPredicted RBP10.97□□□□□ -0.65
TMEM260-208ENST00000555905 ZNF180Q9UJW8 692 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 FBXO5Q9UKT4 447 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 TECTAO75443 2155 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 NCOR1O75376 2440 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 K7ESF4 209 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 GAPDHSO14556 408 aaPredicted RBP10.96□□□□□ -0.65
TMEM260-208ENST00000555905 AXIN1O15169 862 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 LAMTOR5O43504 91 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 UGT1A9O60656 530 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 NDUFS2O75306 463 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 SASH3O75995 380 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 KRT38O76015 456 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 UGT1A6P19224 532 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 UGT1A1P22309 533 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 UGT1A4P22310 534 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 CNTFP26441 200 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 SPRP35270 261 aaPredicted RBP10.96□□□□□ -0.65
TMEM260-208ENST00000555905 UGT1A3P35503 534 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 UGT1A5P35504 534 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 GPR1P46091 355 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 CD151P48509 253 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 CSE1LP55060 971 aaKnown RBP10.96□□□□□ -0.65
TMEM260-208ENST00000555905 MPP1Q00013 466 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 LRRC14Q15048 493 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 AGERQ15109 404 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 RASA2Q15283 850 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 TYSND1Q2T9J0 566 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 ATP13A5Q4VNC0 1218 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 TMEM259Q4ZIN3 620 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 USP39Q53GS9 565 aaKnown RBP10.96□□□□□ -0.65
TMEM260-208ENST00000555905 TMEM31Q5JXX7 168 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 RAET1GQ6H3X3 334 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 PSAPL1Q6NUJ1 521 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 ADGRD1Q6QNK2 874 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 PACS1Q6VY07 963 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 NLRP8Q86W28 1048 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 DCAKDQ8WVC6 231 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 ASB12Q8WXK4 309 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 DHRS4Q9BTZ2 278 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 SLC17A9Q9BYT1 436 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 STMN4Q9H169 189 aaPredicted RBP10.96□□□□□ -0.65
TMEM260-208ENST00000555905 CENPHQ9H3R5 247 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 UGT1A7Q9HAW7 530 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 UGT1A10Q9HAW8 530 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 UGT1A8Q9HAW9 530 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 WSB2Q9NYS7 404 aaPredicted RBP10.96□□□□□ -0.65
TMEM260-208ENST00000555905 SLC17A6Q9P2U8 582 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 ZFR2Q9UPR6 939 aaKnown RBP10.96□□□□□ -0.65
TMEM260-208ENST00000555905 PSAT1Q9Y617 370 aa10.96□□□□□ -0.65
TMEM260-208ENST00000555905 BDP1A6H8Y1 2624 aa10.96□□□□□ -0.66
TMEM260-208ENST00000555905 IGHV1OR15-9A0A0B4J2B8 117 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 TRBV5-4A0A0C4DH59 114 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 IQANK1A0A1B0GTG1 560 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 RGS16O15492 202 aaPredicted RBP10.95□□□□□ -0.66
TMEM260-208ENST00000555905 FAM155BO75949 473 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 KRT37O76014 449 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 S1PR4O95977 384 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 PAK4O96013 591 aaPredicted RBP10.95□□□□□ -0.66
TMEM260-208ENST00000555905 AHSGP02765 367 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 PCCBP05166 539 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 PRSS56P0CW18 603 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 ACRV1P26436 265 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 GCAP28676 217 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 ATP5DP30049 168 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 MAT2AP31153 395 aaKnown RBP10.95□□□□□ -0.66
TMEM260-208ENST00000555905 HOXA6P31267 233 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 NUDT1P36639 197 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 PTGER3P43115 390 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 LEPRP48357 1165 aaKnown RBP10.95□□□□□ -0.66
TMEM260-208ENST00000555905 CDKN1CP49918 316 aaPredicted RBP10.95□□□□□ -0.66
TMEM260-208ENST00000555905 CCR5P51681 352 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 PPP2CBP62714 309 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 PPP2CAP67775 309 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 GPS2Q13227 327 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 SEMA3AQ14563 771 aa10.95□□□□□ -0.66
TMEM260-208ENST00000555905 NUMA1Q14980 2115 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms