RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 GSTA5Q7RTV2 222 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 CTU1Q7Z7A3 348 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PIM3Q86V86 326 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TDRPQ86YL5 185 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 DENND6AQ8IWF6 608 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 DHX40Q8IX18 779 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 CCDC105Q8IYK2 499 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TMEM199Q8N511 208 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PDILTQ8N807 584 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TEX45Q8NA69 505 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ENGASEQ8NFI3 743 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 GJC3Q8NFK1 279 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 GABPB2Q8TAK5 448 aaPredicted RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SLC35F5Q8WV83 523 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 INPP5DQ92835 1189 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TMEM18Q96B42 140 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 FAM149B1Q96BN6 582 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 OTULINQ96BN8 352 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 INTS12Q96CB8 462 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PERPQ96FX8 193 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 COG3Q96JB2 828 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TIGD1Q96MW7 591 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 GFM1Q96RP9 751 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SIN3AQ96ST3 1273 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 MAP7D2Q96T17 732 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ITPAQ9BY32 194 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 POLDIP3Q9BY77 421 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 NPFFR1Q9GZQ6 430 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ISCUQ9H1K1 167 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 MUC13Q9H3R2 512 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 EIF2B3Q9NR50 452 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SIRT3Q9NTG7 399 aaPredicted RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 RNF186Q9NXI6 227 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ANKRD10Q9NXR5 420 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 EHD2Q9NZN4 543 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 LIMA1Q9UHB6 759 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 HAO1Q9UJM8 370 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 FBXO2Q9UK22 296 aaPredicted RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 INTS6Q9UL03 887 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TRIM17Q9Y577 477 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 KCNE2Q9Y6J6 123 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 CAPN7Q9Y6W3 813 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 CD163L1Q9NR16 1453 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 UTYO14607 1347 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TTC21AQ8NDW8 1320 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ROCK2O75116 1388 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 KDM3BQ7LBC6 1761 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TRIOO75962 3097 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 CELSR3Q9NYQ7 3312 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 FAM237BA0A1B0GVD1 139 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 FSD2A1L4K1 749 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 HSPB2A8KAH6 182 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 NPIPB11E5RHQ5 1161 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 IFNL4K9M1U5 179 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SNAP23O00161 211 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 CHL1O00533 1208 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SEC14L5O43304 696 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 LIASO43766 372 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 DOK2O60496 412 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PTP4A3O75365 173 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 MTA2O94776 668 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 OAZ2O95190 189 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SYF2O95926 243 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 HOXB5P09067 269 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 CDAP32320 146 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 DCTDP32321 178 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PBX3P40426 434 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 MLH1P40692 756 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 HDAC4P56524 1084 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 FAM27E3Q08E93 113 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 GOLGA8DPQ0D2H9 430 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 GRIK3Q13003 919 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ITGADQ13349 1161 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PDE1CQ14123 709 aaPredicted RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 FRG1Q14331 258 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ARHGEF6Q15052 776 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 MED22Q15528 200 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 HSPB2Q16082 182 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SOWAHAQ2M3V2 549 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PRTGQ2VWP7 1150 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 DPCR1Q3MIW9 517 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ESCO2Q56NI9 601 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 DCAF6Q58WW2 860 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PRAMEF19Q5SWL8 479 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 DCAF12L2Q5VW00 463 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PRR5LQ6MZQ0 368 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 KIAA1161Q6NSJ0 714 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 LRRC8EQ6NSJ5 796 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 CFAP161Q6P656 301 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TSSK4Q6SA08 328 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PALB2Q86YC2 1186 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ZCCHC9Q8N567 271 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PARP16Q8N5Y8 322 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 FRMD1Q8N878 549 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 CNBD1Q8NA66 436 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TMEM116Q8NCL8 245 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 B4GALNT2Q8NHY0 566 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TMEM163Q8TC26 289 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 NEK9Q8TD19 979 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PSPC1Q8WXF1 523 aaKnown RBP1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms