RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PADI4Q9UM07 663 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 SUFUQ9UMX1 484 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 JRKLQ9Y4A0 524 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 SAR1BQ9Y6B6 198 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 FREM2Q5SZK8 3169 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 ZFC3H1O60293 1989 aaKnown RBP12.98□□□□□ -0.33
SHMT2-211ENST00000554310 LOC285095A0A1B0GVY8 99 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 TRABD2BA6NFA1 517 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 TCEA3O75764 348 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 CAPNS1P04632 268 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 ATP1A1P05023 1023 aaKnown RBP12.98□□□□□ -0.33
SHMT2-211ENST00000554310 RBP3P10745 1247 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 HLA-DPA1P20036 260 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 RBL1P28749 1068 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 GNPDA1P46926 289 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 EIF3EP60228 445 aaKnown RBP12.98□□□□□ -0.33
SHMT2-211ENST00000554310 CKAP4Q07065 602 aaKnown RBP12.98□□□□□ -0.33
SHMT2-211ENST00000554310 PEX6Q13608 980 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 LRP8Q14114 963 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 PDPK2PQ6A1A2 396 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 DOK6Q6PKX4 331 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 GPR156Q8NFN8 814 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 GPBAR1Q8TDU6 330 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 OXNAD1Q96HP4 312 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-211ENST00000554310 HES6Q96HZ4 224 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 PPP1R2P1Q96PQ5 205 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 OR2M4Q96R27 311 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 AGAP2Q99490 1192 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 ZSCAN5AQ9BUG6 496 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 FSD1LQ9BXM9 530 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 GPR63Q9BZJ6 419 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 NRSN2Q9GZP1 204 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 TRABDQ9H4I3 376 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 HACD3Q9P035 362 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 SIRPGQ9P1W8 387 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 GULP1Q9UBP9 304 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 PACSIN2Q9UNF0 486 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-211ENST00000554310 SHOC2Q9UQ13 582 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 FAM208BQ5VWN6 2430 aa12.98□□□□□ -0.33
SHMT2-211ENST00000554310 WDFY3Q8IZQ1 3526 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 ZZEF1O43149 2961 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 FADS2P1A8MWK0 482 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 INPP4BO15327 924 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 DDX3YO15523 660 aaKnown RBP12.97□□□□□ -0.33
SHMT2-211ENST00000554310 ANXA9O76027 345 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 SLC4A1P02730 911 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 FGF1P05230 155 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 PIRTP0C851 137 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 KLF1Q13351 362 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-211ENST00000554310 C14orf28Q4W4Y0 310 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 PERM1Q5SV97 790 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 AADACL2Q6P093 401 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 OGFOD3Q6PK18 319 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 RBM44Q6ZP01 1051 aaKnown RBP12.97□□□□□ -0.33
SHMT2-211ENST00000554310 TMC3Q7Z5M5 1100 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 TRIM74Q86UV6 250 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 GALNT13Q8IUC8 556 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 TRAM1L1Q8N609 369 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 FAM46DQ8NEK8 389 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 IPMKQ8NFU5 416 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 CCL4L1Q8NHW4 92 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 GRAMD1AQ96CP6 724 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 EID2BQ96D98 161 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 MRGPRX2Q96LB1 330 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 SPATA13Q96N96 652 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 CCDC3Q9BQI4 270 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 ZFYVE26Q68DK2 2539 aa12.97□□□□□ -0.33
SHMT2-211ENST00000554310 ZNF106Q9H2Y7 1883 aaKnown RBP12.96□□□□□ -0.33
SHMT2-211ENST00000554310 CTAGE15A4D2H0 777 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 B4DGG1 531 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 F5H423 210 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-211ENST00000554310 KCNN4O15554 427 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 NOBOXO60393 691 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 CSO75390 466 aaKnown RBP12.96□□□□□ -0.33
SHMT2-211ENST00000554310 FUCA1P04066 466 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 CTAGE8P0CG41 777 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 HMGCLP35914 325 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 ADCY8P40145 1251 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 POLD2P49005 469 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 GEMP55040 296 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 CTBSQ01459 385 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 RTP5Q14D33 572 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 PYCR3Q53H96 274 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 SIRPB2Q5JXA9 342 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 TEX35Q5T0J7 233 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 CERCAMQ5T4B2 595 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 ZDHHC20Q5W0Z9 365 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 DARS2Q6PI48 645 aaKnown RBP12.96□□□□□ -0.33
SHMT2-211ENST00000554310 FBXO38Q6PIJ6 1188 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 CTAGE6Q86UF2 777 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 NRROSQ86YC3 692 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 CTAGE4Q8IX94 777 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 MDM1Q8TC05 714 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 PTCD2Q8WV60 388 aaKnown RBP12.96□□□□□ -0.33
SHMT2-211ENST00000554310 CCDC74AQ96AQ1 378 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 PLEKHG4BQ96PX9 1271 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 SPATA16Q9BXB7 569 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 DPEP2Q9H4A9 486 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 SUDS3Q9H7L9 328 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-211ENST00000554310 C10orf88Q9H8K7 445 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms