RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TNFP01375 233 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 THRAP10827 490 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 PON1P27169 355 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 CCR10P46092 362 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 LIG3P49916 1009 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 STX17P56962 302 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 OR1D5P58170 312 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 CDC20Q12834 499 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 RALGDSQ12967 914 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 CLPPQ16740 277 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-219ENST00000553488 UGP2Q16851 508 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 INO80DQ53TQ3 878 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-219ENST00000553488 ARCQ7LC44 396 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 TAF8Q7Z7C8 310 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 PIM3Q86V86 326 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 NRROSQ86YC3 692 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 IRF2BP1Q8IU81 584 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 FAM71AQ8IYT1 594 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 PELI3Q8N2H9 469 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 BMPERQ8N8U9 685 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 FAM46DQ8NEK8 389 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 OR56A4Q8NGH8 313 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 C9orf43Q8TAL5 461 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-219ENST00000553488 CASKIN2Q8WXE0 1202 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 C18orf8Q96DM3 657 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 HMCESQ96FZ2 354 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 SLC45A3Q96JT2 553 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 EXOC2Q96KP1 924 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 TIGD1Q96MW7 591 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 TAAR9Q96RI9 348 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 DDA1Q9BW61 102 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 ZNF71Q9NQZ8 489 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-219ENST00000553488 OR12D3Q9UGF7 316 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 ST14Q9Y5Y6 855 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 ADGRG4Q8IZF6 3080 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 FAM170AA1A519 330 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 PRSS38A1L453 326 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 GOLGA8SH3BPF8 625 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 FOXN3O00409 490 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-219ENST00000553488 TNFRSF10CO14798 259 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 NKX2-8O15522 239 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 BUB1BO60566 1050 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-219ENST00000553488 RAD1O60671 282 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 PRKCGP05129 697 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 HOXC4P09017 264 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-219ENST00000553488 CD1CP29017 333 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 OAS2P29728 719 aaKnown RBP7.28□□□□□ -1.24
ATXN3-219ENST00000553488 ADRA1BP35368 520 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 KRT9P35527 623 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 TRIM23P36406 574 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 LIMK2P53671 638 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 RHOAP61586 193 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 RPS26P62854 115 aaKnown RBP7.28□□□□□ -1.24
ATXN3-219ENST00000553488 TAGLNQ01995 201 aaKnown RBP7.28□□□□□ -1.24
ATXN3-219ENST00000553488 RAD51Q06609 339 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 PAK1Q13153 545 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 TRA2AQ13595 282 aaKnown RBP eCLIP7.28□□□□□ -1.24
ATXN3-219ENST00000553488 ARHGEF7Q14155 803 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 NCAPHQ15003 741 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 EXOC3L4Q17RC7 722 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 C15orf59Q2T9L4 293 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-219ENST00000553488 AMZ1Q400G9 498 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 RWDD4Q6NW29 188 aaKnown RBP7.28□□□□□ -1.24
ATXN3-219ENST00000553488 GBP6Q6ZN66 633 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 ELOA2Q8IYF1 753 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-219ENST00000553488 CACNA2D3Q8IZS8 1091 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 CCDC185Q8N715 623 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 EMC1Q8N766 993 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 TMEM35BQ8NCS4 154 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 KIAA1524Q8TCG1 905 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 HCAR2Q8TDS4 363 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 PATE1Q8WXA2 126 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 ART4Q93070 314 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 TBC1D31Q96DN5 1066 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 CATSPER2Q96P56 530 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 LGR4Q9BXB1 951 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 KRTAP4-8Q9BYQ9 185 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 SPRY4Q9C004 299 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 DPEP2Q9H4A9 486 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 PDFQ9HBH1 243 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 METTL5Q9NRN9 209 aaKnown RBP7.28□□□□□ -1.24
ATXN3-219ENST00000553488 SPATS2LQ9NUQ6 558 aaKnown RBP7.28□□□□□ -1.24
ATXN3-219ENST00000553488 TMEM9Q9P0T7 183 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 PILRAQ9UKJ1 303 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 HPCAL4Q9UM19 191 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 ATP8A1Q9Y2Q0 1164 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 DAAM1Q9Y4D1 1078 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 APCP25054 2843 aa7.28□□□□□ -1.24
ATXN3-219ENST00000553488 CSMD2Q7Z408 3487 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 IGHV1OR21-1A0A087WYE8 117 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 LOC101059948A0A1B0GTJ6 334 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 CFAP69A5D8W1 941 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 B4E171 279 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 CACNB4O00305 520 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-219ENST00000553488 MTSS1O43312 755 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 BUB1O43683 1085 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 RECQL5O94762 991 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-219ENST00000553488 LSM8O95777 96 aaKnown RBP7.27□□□□□ -1.25
ATXN3-219ENST00000553488 FUCA1P04066 466 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 FGF1P05230 155 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms