RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 CCDC68Q9H2F9 335 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 FBRSL1Q9HCM7 1045 aaKnown RBP19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 TAS2R13Q9NYV9 303 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 KLHL14Q9P2G3 628 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 THAP10Q9P2Z0 257 aaPredicted RBP19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 PPM1HQ9ULR3 514 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 FAM50BQ9Y247 325 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 TMEM265A0A087WTH1 108 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 RHOBTB1O94844 696 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 MYL2P10916 166 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 ZNF30P17039 623 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 CD9P21926 228 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 GRK2P25098 689 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 ARRB2P32121 409 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 VIPR1P32241 457 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 SPINT3P49223 89 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 IFT88Q13099 833 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 ACAP2Q15057 778 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 GPR33Q49SQ1 333 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 TECRLQ5HYJ1 363 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 SERPINA13PQ6UXR4 307 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 TTC7BQ86TV6 843 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 PPP1R14CQ8TAE6 165 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 ZNF398Q8TD17 642 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 UCMAQ8WVF2 138 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 NPHS2Q9NP85 383 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 OAS3Q9Y6K5 1087 aaKnown RBP19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 ITM2AO43736 263 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 TRIM13O60858 407 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 ESR1P03372 595 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 PRNPP04156 253 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 CYP2A6P11509 494 aaPredicted RBP19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 IGFBP4P22692 258 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 IL12RB1P42701 662 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 KPNA2P52292 529 aaKnown RBP19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 METAP1P53582 386 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 ELAVL3Q14576 367 aaKnown RBP19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 NAPRTQ6XQN6 538 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 PARS2Q7L3T8 475 aaKnown RBP19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 TMIEQ8NEW7 156 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 PLEKHG4BQ96PX9 1271 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 FAM129BQ96TA1 746 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 GALPQ9UBC7 116 aa19.43■□□□□ 0.7
RBFOX1-215ENST00000553186 PRMT5O14744 637 aaPredicted RBP19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 DLX3O60479 287 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 ACRV1P26436 265 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 SOX9P48436 509 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 RALGDSQ12967 914 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 PDAP1Q13442 181 aaKnown RBP19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 PAQR3Q6TCH7 311 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 ISCA2Q86U28 154 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 C10orf82Q8WW14 230 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 OR8D1Q8WZ84 308 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 KCNJ9Q92806 393 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 ACOX2Q99424 681 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 GPR21Q99679 349 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 BOCQ9BWV1 1114 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 ZDHHC4Q9NPG8 344 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 ZNF106Q9H2Y7 1883 aaKnown RBP19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 KPNA3O00505 521 aaPredicted RBP19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 NIPSNAP2O75323 286 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 SLC1A6P48664 564 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 ARHGEF7Q14155 803 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 ZDHHC20Q5W0Z9 365 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 EGFLAMQ63HQ2 1017 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 HSD11B1LQ7Z5J1 315 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 RFWD2Q8NHY2 731 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 RMDN2Q96LZ7 410 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 SLC30A3Q99726 388 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 COMMD10Q9Y6G5 202 aa19.42■□□□□ 0.7
RBFOX1-215ENST00000553186 GOLGA8CPA6NN73 597 aa19.41■□□□□ 0.7
RBFOX1-215ENST00000553186 LYPLA1O75608 230 aaPredicted RBP19.41■□□□□ 0.7
RBFOX1-215ENST00000553186 TROVE2P10155 538 aaKnown RBP eCLIP19.41■□□□□ 0.7
RBFOX1-215ENST00000553186 CD1DP15813 335 aa19.41■□□□□ 0.7
RBFOX1-215ENST00000553186 RPS3P23396 243 aaKnown RBP eCLIP19.41■□□□□ 0.7
RBFOX1-215ENST00000553186 PREPLQ4J6C6 727 aaPredicted RBP19.41■□□□□ 0.7
RBFOX1-215ENST00000553186 KLC3Q6P597 504 aa19.41■□□□□ 0.7
RBFOX1-215ENST00000553186 DPPA4Q7L190 304 aa19.41■□□□□ 0.7
RBFOX1-215ENST00000553186 NXPE1Q8N323 547 aa19.41■□□□□ 0.7
RBFOX1-215ENST00000553186 SORT1Q99523 831 aa19.41■□□□□ 0.7
RBFOX1-215ENST00000553186 GATA5Q9BWX5 397 aaPredicted RBP19.41■□□□□ 0.7
RBFOX1-215ENST00000553186 TRIM55Q9BYV6 548 aa19.41■□□□□ 0.7
RBFOX1-215ENST00000553186 KCNK13Q9HB14 408 aa19.41■□□□□ 0.7
RBFOX1-215ENST00000553186 CD207Q9UJ71 328 aa19.41■□□□□ 0.7
RBFOX1-215ENST00000553186 PCDHB1Q9Y5F3 818 aa19.41■□□□□ 0.7
RBFOX1-215ENST00000553186 APODP05090 189 aa19.4■□□□□ 0.7
RBFOX1-215ENST00000553186 RBP1P09455 135 aa19.4■□□□□ 0.7
RBFOX1-215ENST00000553186 TFEBP19484 476 aa19.4■□□□□ 0.7
RBFOX1-215ENST00000553186 ITGB7P26010 798 aa19.4■□□□□ 0.7
RBFOX1-215ENST00000553186 PPARGP37231 505 aaPredicted RBP19.4■□□□□ 0.7
RBFOX1-215ENST00000553186 MMP12P39900 470 aa19.4■□□□□ 0.7
RBFOX1-215ENST00000553186 KCNC1P48547 511 aa19.4■□□□□ 0.7
RBFOX1-215ENST00000553186 ATP13A5Q4VNC0 1218 aa19.4■□□□□ 0.7
RBFOX1-215ENST00000553186 LYPLAL1Q5VWZ2 237 aa19.4■□□□□ 0.7
RBFOX1-215ENST00000553186 LIPMQ5VYY2 423 aa19.4■□□□□ 0.7
RBFOX1-215ENST00000553186 RBFAQ8N0V3 343 aa19.4■□□□□ 0.7
RBFOX1-215ENST00000553186 MICALL1Q8N3F8 863 aa19.4■□□□□ 0.7
RBFOX1-215ENST00000553186 GIMAP7Q8NHV1 300 aa19.4■□□□□ 0.7
RBFOX1-215ENST00000553186 PIP4K2CQ8TBX8 421 aa19.4■□□□□ 0.7
RBFOX1-215ENST00000553186 PTERQ96BW5 349 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms