RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 ECI2O75521 394 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 PDE5AO76074 875 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 CDK14O94921 469 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 TSPAN12O95859 305 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 ESR1P03372 595 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 FGF4P08620 206 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 RPSAP08865 295 aaKnown RBP13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 VHLP40337 213 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 NUDT2P50583 147 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 SESN3P58005 492 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 ERVFC1P60507 584 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 SH3BP2P78314 561 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 TSNQ15631 228 aaKnown RBP13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 UGT3A2Q3SY77 523 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 CLEC6AQ6EIG7 209 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 C16orf89Q6UX73 402 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 FBXO39Q8N4B4 442 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 SIDT2Q8NBJ9 832 aaKnown RBP13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 KCNJ9Q92806 393 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 ZNF570Q96NI8 536 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 EMILIN2Q9BXX0 1053 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 SMG9Q9H0W8 520 aaKnown RBP13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 P2RY12Q9H244 342 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 INSL6Q9Y581 213 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 MTCL1Q9Y4B5 1905 aaKnown RBP13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 A0A0J9YYE9 177 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 SYCE1LA8MT33 242 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 UBDO15205 165 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 FKBP6O75344 327 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 ZNF821O75541 412 aaPredicted RBP13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 SORBS2O94875 1100 aaKnown RBP13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 IGSF6O95976 241 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 GLUD1P00367 558 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 TRBC1P01850 177 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 FGBP02675 491 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 CYBBP04839 570 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 HSPA1AP0DMV8 641 aaKnown RBP13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 HSPA1BP0DMV9 641 aaKnown RBP13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 GKP32189 559 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 CCR2P41597 374 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 MTTPP55157 894 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 IL2P60568 153 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 DGKKQ5KSL6 1271 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 CERS6Q6ZMG9 384 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 CYHR1Q6ZMK1 362 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 DSELQ8IZU8 1212 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 GIMAP7Q8NHV1 300 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 CD200R1Q8TD46 325 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 NRG4Q8WWG1 115 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 FUBP1Q96AE4 644 aaKnown RBP13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 RCN3Q96D15 328 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 RSRC1Q96IZ7 334 aaKnown RBP13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 C19orf43Q9BQ61 176 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 TCF25Q9BQ70 676 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 TNKS2Q9H2K2 1166 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 ATP13A3Q9H7F0 1226 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 ZFYVE1Q9HBF4 777 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 HCFC1R1Q9NWW0 138 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 ANGPTL2Q9UKU9 493 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 PRPF19Q9UMS4 504 aaKnown RBP13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 IRAK3Q9Y616 596 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 CXorf51AA0A1B0GTR3 108 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 NPEPPSL1A6NEC2 478 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 BTN3A1O00481 513 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 PPP6CO00743 305 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 CLASP2O75122 1294 aaKnown RBP13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 GPC4O75487 556 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 ANPEPP15144 967 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 CHRM3P20309 590 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 EEF1DP29692 281 aaKnown RBP13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 HNF1BP35680 557 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 AP2B1P63010 937 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 SQLEQ14534 574 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 TAF11Q15544 211 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 CDKN3Q16667 212 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 PPP1R3AQ16821 1122 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 UGT3A1Q6NUS8 523 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 AAGABQ6PD74 315 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 LRRC74BQ6ZQY2 392 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 LARP4Q71RC2 724 aaKnown RBP eCLIP13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 HPS6Q86YV9 775 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 CMTM8Q8IZV2 173 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 EEF1AKMT1Q8WVE0 214 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 NSUN5Q96P11 429 aaKnown RBP13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 EFCAB1Q9HAE3 211 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 MID1IP1Q9NPA3 183 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 POMPQ9Y244 141 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 WASF2Q9Y6W5 498 aa13.92□□□□□ -0.18
RAB3IP-216ENST00000552199 DOCK6Q96HP0 2047 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 SCN8AQ9UQD0 1980 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 HIDE1A8MVS5 230 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 E5RI56 91 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 GAPDHSO14556 408 aaPredicted RBP13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 PRMT5O14744 637 aaPredicted RBP13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 AZIN1O14977 448 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 GPR39O43194 453 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 KLK8O60259 260 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 ARSAP15289 507 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 CCNIQ14094 377 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms