RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 BTKQ06187 659 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 RAD51Q06609 339 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 STK40Q8N2I9 435 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 CPSF7Q8N684 471 aaKnown RBP11.44□□□□□ -0.58
RAB5C-208ENST00000551338 SIDT2Q8NBJ9 832 aaKnown RBP11.44□□□□□ -0.58
RAB5C-208ENST00000551338 MICAL1Q8TDZ2 1067 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 IRF7Q92985 503 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.44□□□□□ -0.58
RAB5C-208ENST00000551338 ZNF707Q96C28 371 aaPredicted RBP11.44□□□□□ -0.58
RAB5C-208ENST00000551338 ECHDC3Q96DC8 303 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 FAR2Q96K12 515 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 TUBGCP5Q96RT8 1024 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 LYSMD1Q96S90 227 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 TRMOQ9BU70 441 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 BBS2Q9BXC9 721 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 C1orf21Q9H246 121 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 LINC00597Q9H2U6 94 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 ZFYVE1Q9HBF4 777 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 SPHK2Q9NRA0 654 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 TDP1Q9NUW8 608 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 MARK1Q9P0L2 795 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 TRMT6Q9UJA5 497 aaKnown RBP11.44□□□□□ -0.58
RAB5C-208ENST00000551338 SLC25A13Q9UJS0 675 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 COMMD10Q9Y6G5 202 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 NPIPB15A6NHN6 443 aaPredicted RBP11.43□□□□□ -0.58
RAB5C-208ENST00000551338 TRPC5OSA6NMA1 111 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 SUPT3HB4E1H0 165 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 CDC7O00311 574 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 PFDN6O15212 129 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 KLK8O60259 260 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 XYLBO75191 536 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 SUPT3HO75486 399 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 TM7SF2O76062 418 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 SUPT7LO94864 414 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 ESR1P03372 595 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 RB1P06400 928 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 RPS17P08708 135 aaKnown RBP11.43□□□□□ -0.58
RAB5C-208ENST00000551338 POU2F2P09086 479 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 HSPA1AP0DMV8 641 aaKnown RBP11.43□□□□□ -0.58
RAB5C-208ENST00000551338 HSPA1BP0DMV9 641 aaKnown RBP11.43□□□□□ -0.58
RAB5C-208ENST00000551338 CD1EP15812 388 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 BPIP17213 487 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 CCND1P24385 295 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 PTGER3P43115 390 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 CCNHP51946 323 aaPredicted RBP11.43□□□□□ -0.58
RAB5C-208ENST00000551338 COPAP53621 1224 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 HERVK_113P63132 956 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 MXRA7P84157 204 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 DMC1Q14565 340 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 TSNQ15631 228 aaKnown RBP11.43□□□□□ -0.58
RAB5C-208ENST00000551338 MYLK3Q32MK0 819 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 LY6G5CQ5SRR4 150 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 ZNF697Q5TEC3 545 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 TMEM198Q66K66 360 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 ELMSAN1Q6PJG2 1045 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 FAM151BQ6UXP7 276 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 TAS2R42Q7RTR8 314 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 SNX20Q7Z614 316 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 GRASPQ7Z6J2 395 aaPredicted RBP11.43□□□□□ -0.58
RAB5C-208ENST00000551338 KIAA0907Q7Z7F0 614 aaPredicted RBP11.43□□□□□ -0.58
RAB5C-208ENST00000551338 TSPAN33Q86UF1 283 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 ADIPOR2Q86V24 386 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 SERPINA9Q86WD7 417 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 CPNE9Q8IYJ1 553 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 ARHGAP24Q8N264 748 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 NKAPQ8N5F7 415 aaKnown RBP11.43□□□□□ -0.58
RAB5C-208ENST00000551338 PCDH20Q8N6Y1 951 aaKnown RBP11.43□□□□□ -0.58
RAB5C-208ENST00000551338 LKAAEAR1Q8TD35 194 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 WDR60Q8WVS4 1066 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 ING5Q8WYH8 240 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 KCNJ9Q92806 393 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 ZSWIM3Q96MP5 696 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 FAM161BQ96MY7 647 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 CATSPER2Q96P56 530 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 ERVK-6Q9BXR3 956 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 CEP44Q9C0F1 390 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 MEAF6Q9HAF1 191 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 RNPEPL1Q9HAU8 725 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 EML4Q9HC35 981 aaKnown RBP11.43□□□□□ -0.58
RAB5C-208ENST00000551338 TBC1D14Q9P2M4 693 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 NKX1-2Q9UD57 310 aaPredicted RBP11.43□□□□□ -0.58
RAB5C-208ENST00000551338 G3BP2Q9UN86 482 aaKnown RBP11.43□□□□□ -0.58
RAB5C-208ENST00000551338 PPIL1Q9Y3C6 166 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 FIS1Q9Y3D6 152 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 L3MBTL1Q9Y468 752 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 PCDHB1Q9Y5F3 818 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 HCFC2Q9Y5Z7 792 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 WNT6Q9Y6F9 365 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 MYO7AQ13402 2215 aa11.43□□□□□ -0.58
RAB5C-208ENST00000551338 CCDC189A1A4V9 331 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 PRMT5O14744 637 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-208ENST00000551338 SLC22A2O15244 555 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 SIX3O95343 332 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-208ENST00000551338 PRAMEF1O95521 474 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 C1SP09871 688 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 TYRP14679 529 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 ARSAP15289 507 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 TSPAN8P19075 237 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 ITGALP20701 1170 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 ITGAXP20702 1163 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms