RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 NFATC3Q12968 1075 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 ELOCQ15369 112 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 SPRED1Q7Z699 444 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 ZFAND4Q86XD8 727 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 DNAAF5Q86Y56 855 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 PHF13Q86YI8 300 aaPredicted RBP8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 REXO1L1PQ8IX06 675 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 TP53INP2Q8IXH6 220 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 CCDC170Q8IYT3 715 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 UMODL1-AS1Q8N2C9 162 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 WDR48Q8TAF3 677 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 CASKIN2Q8WXE0 1202 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 EXTL1Q92935 676 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 WDR92Q96MX6 357 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 RBM15Q96T37 977 aaKnown RBP eCLIP8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 EIF3CQ99613 913 aaKnown RBP8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 NCAPGQ9BPX3 1015 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 SELENOOQ9BVL4 669 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 LGR4Q9BXB1 951 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 C1QTNF7Q9BXJ2 289 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 SLC39A8Q9C0K1 460 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 TMEM168Q9H0V1 697 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 LRRN3Q9H3W5 708 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 RETREG1Q9H6L5 497 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 NHEJ1Q9H9Q4 299 aaPredicted RBP8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 TAS2R14Q9NYV8 317 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 UBA2Q9UBT2 640 aaPredicted RBP8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 NENFQ9UMX5 172 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 ATP8A1Q9Y2Q0 1164 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 PPP2R2CQ9Y2T4 447 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 PCDHGA7Q9Y5G6 932 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 RNF215Q9Y6U7 377 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 LRP4O75096 1905 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 RELNP78509 3460 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 FLNCQ14315 2725 aa8.74□□□□□ -1.01
ATP2B1-207ENST00000550716 PRAMEF33A0A0G2JMD5 474 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 LOC100996750A0A140TA64 210 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 CAPN8A6NHC0 703 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 SIGLEC16A6NMB1 481 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 A8MX80 341 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 PRAMEF10O60809 474 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 PRAMEF11O60813 436 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 RECQL5O94762 991 aaPredicted RBP8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 ALPIP09923 528 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 CCDC175P0C221 793 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 FAM87AP0C7U9 286 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 FERP16591 822 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 CCKBRP32239 447 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 CYLC1P35663 651 aaPredicted RBP8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 STAT1P42224 750 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 ZNF143P52747 638 aaPredicted RBP8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 MAZP56270 477 aaKnown RBP8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 YBEYP58557 167 aaPredicted RBP8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 CYP4F2P78329 520 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 RAD51Q06609 339 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 ZFP36L1Q07352 338 aaKnown RBP8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 PCDH1Q08174 1060 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 ELP6Q0PNE2 266 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 MTM1Q13496 603 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 HLTFQ14527 1009 aaKnown RBP eCLIP8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 C16orf72Q14CZ0 275 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 PTPRRQ15256 657 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 ASIC2Q16515 512 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 PARP15Q460N3 678 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 CERCAMQ5T4B2 595 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 DNAJC24Q6P3W2 148 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 OGFOD3Q6PK18 319 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 LVRNQ6Q4G3 990 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 TRIM72Q6ZMU5 477 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 CYP4V2Q6ZWL3 525 aaPredicted RBP8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 SLITRK4Q8IW52 837 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 ARHGAP12Q8IWW6 846 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 ARFGAP1Q8N6T3 406 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 NPWQ8N729 165 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 ACRBPQ8NEB7 543 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 HTR3CQ8WXA8 447 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 PEBP4Q96S96 227 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 DESI2Q9BSY9 194 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 KRTAP4-6Q9BYQ5 205 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 TRIM7Q9C029 511 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 CLEC4MQ9H2X3 399 aaPredicted RBP8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 SEMA6CQ9H3T2 930 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 SOX17Q9H6I2 414 aaPredicted RBP8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 SUDS3Q9H7L9 328 aaPredicted RBP8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 SEPT11Q9NVA2 429 aaKnown RBP8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 ZNHIT6Q9NWK9 470 aaKnown RBP8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 ACSL6Q9UKU0 697 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 ST14Q9Y5Y6 855 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 EPN1Q9Y6I3 576 aaPredicted RBP8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 DGKBQ9Y6T7 804 aa8.73□□□□□ -1.01
ATP2B1-207ENST00000550716 A0A0U1RQJ8 604 aa8.72□□□□□ -1.01
ATP2B1-207ENST00000550716 A0A0U1RQS6 177 aa8.72□□□□□ -1.01
ATP2B1-207ENST00000550716 TMEM110-MUSTN1A8MSY1 372 aa8.72□□□□□ -1.01
ATP2B1-207ENST00000550716 TOR1BO14657 336 aa8.72□□□□□ -1.01
ATP2B1-207ENST00000550716 FUCA1P04066 466 aa8.72□□□□□ -1.01
ATP2B1-207ENST00000550716 CALB1P05937 261 aa8.72□□□□□ -1.01
ATP2B1-207ENST00000550716 LIPCP11150 499 aa8.72□□□□□ -1.01
ATP2B1-207ENST00000550716 ITGB6P18564 788 aa8.72□□□□□ -1.01
ATP2B1-207ENST00000550716 HTR1BP28222 390 aa8.72□□□□□ -1.01
ATP2B1-207ENST00000550716 PAPOLAP51003 745 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms