RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 MARCH6O60337 910 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 TBCAO75347 108 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 AKAP3O75969 853 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 BAG2O95816 211 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 ONECUT2O95948 504 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 AHSGP02765 367 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 TFAP2AP05549 437 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 SERPINA6P08185 405 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 CD48P09326 243 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 DLDP09622 509 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 FAM58BPP0C7Q3 252 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 FTH1P19P0C7X4 201 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 DHRS4L1P0CG22 281 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 CBSLP0DN79 551 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 ACTN1P12814 892 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 CREB1P16220 341 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 POLR2EP19388 210 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 PRDX6P30041 224 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 STIP1P31948 543 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 RPA3P35244 121 aaPredicted RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 HOXD12P35452 270 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 CBSP35520 551 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 FDFT1P37268 417 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 IL6STP40189 918 aaPredicted RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 FMO5P49326 533 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 NEK3P51956 506 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 HDAC4P56524 1084 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 GSTO1P78417 241 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 COG7P83436 770 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 FOLH1Q04609 750 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 BTKQ06187 659 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 WASHC5Q12768 1159 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 TBL3Q12788 808 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 NOGQ13253 232 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 TRPC3Q13507 836 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 UBE4AQ14139 1066 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 TMED2Q15363 201 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 BCL2A1Q16548 175 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 PARP10Q53GL7 1025 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 CAVIN4Q5BKX8 364 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 RARS2Q5T160 578 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 STXBP5Q5T5C0 1151 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 OGFRL1Q5TC84 451 aaPredicted RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 FAM160B1Q5W0V3 765 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 THOC7Q6I9Y2 204 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 RFWD3Q6PCD5 774 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 KLHL35Q6PF15 583 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 LVRNQ6Q4G3 990 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 KIRREL2Q6UWL6 708 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 RBM44Q6ZP01 1051 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 RINLQ6ZS11 566 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 LINC00299Q6ZSB3 139 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 ARCQ7LC44 396 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 NECAB2Q7Z6G3 386 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 ARPINQ7Z6K5 226 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 GPBP1Q86WP2 473 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 PPP1R3BQ86XI6 285 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 ZNF677Q86XU0 584 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 TPH2Q8IWU9 490 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 KATNAL2Q8IYT4 538 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 ZNF444Q8N0Y2 327 aaPredicted RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 CCDC33Q8N5R6 958 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 NANOGP1Q8N7R0 232 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 BANPQ8N9N5 519 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 MIGA1Q8NAN2 632 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 MINDY2Q8NBR6 621 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 OLIG1Q8TAK6 271 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 ZNF420Q8TAQ5 688 aaPredicted RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 HM13Q8TCT9 377 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 DTX3LQ8TDB6 740 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 ADAMTS15Q8TE58 950 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 GDPD5Q8WTR4 605 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 PSPC1Q8WXF1 523 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 BORCS5Q969J3 196 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 EME1Q96AY2 570 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 NMD3Q96D46 503 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 R3HDM4Q96D70 268 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 CMTM5Q96DZ9 223 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 ABHD8Q96I13 439 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 CNDP2Q96KP4 475 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 CYTH2Q99418 400 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 SERPINI1Q99574 410 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 OLFM1Q99784 485 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 THAP7Q9BT49 309 aaPredicted RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 FRMD8Q9BZ67 464 aaPredicted RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 NUF2Q9BZD4 464 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 DCLK3Q9C098 648 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 INTS2Q9H0H0 1204 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 ZCWPW1Q9H0M4 648 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 THAP2Q9H0W7 228 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 RBM38Q9H0Z9 239 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 GOLPH3Q9H4A6 298 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 DHX33Q9H6R0 707 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 C10orf88Q9H8K7 445 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 USP29Q9HBJ7 922 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 MAGEE1Q9HCI5 957 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 MRPL40Q9NQ50 206 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 MRGBPQ9NV56 204 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 TRNAU1APQ9NX07 287 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms