RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.48□□□□□ -0.41
LETMD1-222ENST00000550274 AOPEPQ8N6M6 819 aa12.48□□□□□ -0.41
LETMD1-222ENST00000550274 NLGN4YQ8NFZ3 816 aaPredicted RBP12.48□□□□□ -0.41
LETMD1-222ENST00000550274 EXD1Q8NHP7 514 aa12.48□□□□□ -0.41
LETMD1-222ENST00000550274 NSMCE1Q8WV22 266 aa12.48□□□□□ -0.41
LETMD1-222ENST00000550274 CATSPER2Q96P56 530 aa12.48□□□□□ -0.41
LETMD1-222ENST00000550274 TEFMQ96QE5 360 aaKnown RBP12.48□□□□□ -0.41
LETMD1-222ENST00000550274 GPN2Q9H9Y4 310 aaPredicted RBP12.48□□□□□ -0.41
LETMD1-222ENST00000550274 ZNF71Q9NQZ8 489 aaPredicted RBP12.48□□□□□ -0.41
LETMD1-222ENST00000550274 AIPL1Q9NZN9 384 aa12.48□□□□□ -0.41
LETMD1-222ENST00000550274 ZNHIT2Q9UHR6 403 aa12.48□□□□□ -0.41
LETMD1-222ENST00000550274 CNOT6Q9ULM6 557 aaKnown RBP12.48□□□□□ -0.41
LETMD1-222ENST00000550274 A6NCN8 305 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 MFSD11O43934 449 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 CLDN7O95471 211 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 ASMTLO95671 621 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 CD48P09326 243 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 SKILP12757 684 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 ZNF30P17039 623 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 IL4RP24394 825 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 SERPINB6P35237 376 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 ITKQ08881 620 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 MMRN1Q13201 1228 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 IGFBP7Q16270 282 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 CHST15Q7LFX5 561 aaPredicted RBP12.47□□□□□ -0.41
LETMD1-222ENST00000550274 NLRP8Q86W28 1048 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 NCSTNQ92542 709 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 BTBD6Q96KE9 485 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 WDR24Q96S15 920 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 TDRD1Q9BXT4 1180 aaKnown RBP12.47□□□□□ -0.41
LETMD1-222ENST00000550274 POLR1EQ9GZS1 481 aaKnown RBP12.47□□□□□ -0.41
LETMD1-222ENST00000550274 ISCUQ9H1K1 167 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 MRPL47Q9HD33 250 aaKnown RBP12.47□□□□□ -0.41
LETMD1-222ENST00000550274 SARS2Q9NP81 518 aaKnown RBP12.47□□□□□ -0.41
LETMD1-222ENST00000550274 ANKMY1Q9P2S6 941 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 KCNK6Q9Y257 313 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 CHKBQ9Y259 395 aa12.47□□□□□ -0.41
LETMD1-222ENST00000550274 MED13Q9UHV7 2174 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 FADS2P1A8MWK0 482 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 CAPN5O15484 640 aaPredicted RBP12.46□□□□□ -0.41
LETMD1-222ENST00000550274 STK17BO94768 372 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 PRLP01236 227 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 PYGLP06737 847 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 MYBL1P10243 752 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 ACP5P13686 325 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 MAP4P27816 1152 aaKnown RBP12.46□□□□□ -0.41
LETMD1-222ENST00000550274 CASRP41180 1078 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 MAPK9P45984 424 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 EPHB1P54762 984 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 FOXK1P85037 733 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 KLHL30Q0D2K2 578 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 ATP1A1-AS1Q5TC04 95 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 ALG1LQ6GMV1 187 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 IYDQ6PHW0 289 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 CEACAM20Q6UY09 585 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 NDUFAF2Q8N183 169 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 C9orf43Q8TAL5 461 aaPredicted RBP12.46□□□□□ -0.41
LETMD1-222ENST00000550274 LRRN4Q8WUT4 740 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 TEKT4Q8WW24 435 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 STARD8Q92502 1023 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 MAML1Q92585 1016 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 KIAA1143Q96AT1 154 aaPredicted RBP12.46□□□□□ -0.41
LETMD1-222ENST00000550274 RNF31Q96EP0 1072 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 TRIM11Q96F44 468 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 TBC1D10AQ9BXI6 508 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 FBXO8Q9NRD0 319 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 VPS18Q9P253 973 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 KLHL3Q9UH77 587 aa12.46□□□□□ -0.41
LETMD1-222ENST00000550274 TMEM184BQ9Y519 407 aaPredicted RBP12.46□□□□□ -0.41
LETMD1-222ENST00000550274 SNX2O60749 519 aa12.45□□□□□ -0.42
LETMD1-222ENST00000550274 DLGAP3O95886 979 aa12.45□□□□□ -0.42
LETMD1-222ENST00000550274 GARSP41250 739 aaKnown RBP12.45□□□□□ -0.42
LETMD1-222ENST00000550274 NIPAL4Q0D2K0 466 aa12.45□□□□□ -0.42
LETMD1-222ENST00000550274 ABHD18Q0P651 414 aa12.45□□□□□ -0.42
LETMD1-222ENST00000550274 GALNT2Q10471 571 aa12.45□□□□□ -0.42
LETMD1-222ENST00000550274 UBAP2LQ14157 1087 aaKnown RBP12.45□□□□□ -0.42
LETMD1-222ENST00000550274 PIGHQ14442 188 aaPredicted RBP12.45□□□□□ -0.42
LETMD1-222ENST00000550274 KRT81Q14533 505 aa12.45□□□□□ -0.42
LETMD1-222ENST00000550274 DEFB109BQ30KR1 87 aa12.45□□□□□ -0.42
LETMD1-222ENST00000550274 HENMT1Q5T8I9 393 aaKnown RBP12.45□□□□□ -0.42
LETMD1-222ENST00000550274 NCBP2-AS2Q69YL0 99 aa12.45□□□□□ -0.42
LETMD1-222ENST00000550274 NIPA2Q8N8Q9 360 aa12.45□□□□□ -0.42
LETMD1-222ENST00000550274 LPCAT1Q8NF37 534 aa12.45□□□□□ -0.42
LETMD1-222ENST00000550274 ARRDC2Q8TBH0 407 aa12.45□□□□□ -0.42
LETMD1-222ENST00000550274 ABHD17AQ96GS6 310 aa12.45□□□□□ -0.42
LETMD1-222ENST00000550274 SIDT1Q9NXL6 827 aaKnown RBP12.45□□□□□ -0.42
LETMD1-222ENST00000550274 ANAPC2Q9UJX6 822 aa12.45□□□□□ -0.42
LETMD1-222ENST00000550274 TTLL3Q9Y4R7 772 aa12.45□□□□□ -0.42
LETMD1-222ENST00000550274 MRPS18BQ9Y676 258 aaKnown RBP12.45□□□□□ -0.42
LETMD1-222ENST00000550274 CENPEQ02224 2701 aa12.45□□□□□ -0.42
LETMD1-222ENST00000550274 MN1Q10571 1320 aaPredicted RBP12.44□□□□□ -0.42
LETMD1-222ENST00000550274 C1orf232A0A0U1RR37 186 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 CLEC18AA5D8T8 446 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 HLA-DQB2P05538 268 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 F3P13726 295 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 ZNF28P17035 718 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 F8A1P23610 371 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 STAT5AP42229 794 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 SPINT3P49223 89 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 ARSEP51690 589 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms