RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 APMAPQ9HDC9 416 aa15.28■□□□□ 0.04
RAB5C-205ENST00000550013 CNOT6Q9ULM6 557 aaKnown RBP15.28■□□□□ 0.04
RAB5C-205ENST00000550013 KCNK6Q9Y257 313 aa15.28■□□□□ 0.04
RAB5C-205ENST00000550013 RELNP78509 3460 aa15.28■□□□□ 0.04
RAB5C-205ENST00000550013 CLDN7O95471 211 aa15.27■□□□□ 0.04
RAB5C-205ENST00000550013 PRLP01236 227 aa15.27■□□□□ 0.04
RAB5C-205ENST00000550013 PYGLP06737 847 aa15.27■□□□□ 0.04
RAB5C-205ENST00000550013 ACP5P13686 325 aa15.27■□□□□ 0.04
RAB5C-205ENST00000550013 TYRO3Q06418 890 aa15.27■□□□□ 0.04
RAB5C-205ENST00000550013 CDC20Q12834 499 aa15.27■□□□□ 0.04
RAB5C-205ENST00000550013 PIGHQ14442 188 aaPredicted RBP15.27■□□□□ 0.04
RAB5C-205ENST00000550013 IYDQ6PHW0 289 aa15.27■□□□□ 0.04
RAB5C-205ENST00000550013 WDR74Q6RFH5 385 aaPredicted RBP15.27■□□□□ 0.04
RAB5C-205ENST00000550013 LRRN4Q8WUT4 740 aa15.27■□□□□ 0.04
RAB5C-205ENST00000550013 MAML1Q92585 1016 aa15.27■□□□□ 0.04
RAB5C-205ENST00000550013 RNF31Q96EP0 1072 aa15.27■□□□□ 0.04
RAB5C-205ENST00000550013 CATSPER2Q96P56 530 aa15.27■□□□□ 0.04
RAB5C-205ENST00000550013 TEFMQ96QE5 360 aaKnown RBP15.27■□□□□ 0.04
RAB5C-205ENST00000550013 TDRD1Q9BXT4 1180 aaKnown RBP15.27■□□□□ 0.04
RAB5C-205ENST00000550013 SARS2Q9NP81 518 aaKnown RBP15.27■□□□□ 0.04
RAB5C-205ENST00000550013 ZNF71Q9NQZ8 489 aaPredicted RBP15.27■□□□□ 0.04
RAB5C-205ENST00000550013 VPS18Q9P253 973 aa15.27■□□□□ 0.04
RAB5C-205ENST00000550013 KLHL3Q9UH77 587 aa15.27■□□□□ 0.04
RAB5C-205ENST00000550013 TUBD1Q9UJT1 453 aa15.27■□□□□ 0.04
RAB5C-205ENST00000550013 TTLL3Q9Y4R7 772 aa15.27■□□□□ 0.04
RAB5C-205ENST00000550013 ZNF106Q9H2Y7 1883 aaKnown RBP15.27■□□□□ 0.03
RAB5C-205ENST00000550013 A6NCN8 305 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 FADS2P1A8MWK0 482 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 CAPN5O15484 640 aaPredicted RBP15.26■□□□□ 0.03
RAB5C-205ENST00000550013 SNX2O60749 519 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 STK17BO94768 372 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 MAP4P27816 1152 aaKnown RBP15.26■□□□□ 0.03
RAB5C-205ENST00000550013 OAS2P29728 719 aaKnown RBP15.26■□□□□ 0.03
RAB5C-205ENST00000550013 GARSP41250 739 aaKnown RBP15.26■□□□□ 0.03
RAB5C-205ENST00000550013 NIPAL4Q0D2K0 466 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 GALNT2Q10471 571 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 IGFBP7Q16270 282 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 ATP1A1-AS1Q5TC04 95 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 ALG1LQ6GMV1 187 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 CEACAM20Q6UY09 585 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 LRRC49Q8IUZ0 686 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 NIPA2Q8N8Q9 360 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 LPCAT1Q8NF37 534 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 ARRDC2Q8TBH0 407 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 KIAA1143Q96AT1 154 aaPredicted RBP15.26■□□□□ 0.03
RAB5C-205ENST00000550013 NAP1L5Q96NT1 182 aaPredicted RBP15.26■□□□□ 0.03
RAB5C-205ENST00000550013 TBC1D10AQ9BXI6 508 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 THAP2Q9H0W7 228 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 RBM22Q9NW64 420 aaKnown RBP eCLIP15.26■□□□□ 0.03
RAB5C-205ENST00000550013 ANAPC7Q9UJX3 599 aa15.26■□□□□ 0.03
RAB5C-205ENST00000550013 C1orf232A0A0U1RR37 186 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 MATN3O15232 486 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 HLA-DQB2P05538 268 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 CASRP41180 1078 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 SSR1P43307 286 aaKnown RBP15.25■□□□□ 0.03
RAB5C-205ENST00000550013 ZNF165P49910 485 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 ARSEP51690 589 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 DEFB109BQ30KR1 87 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 ANO6Q4KMQ2 910 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 FILIP1LQ4L180 1135 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 ATP13A4Q4VNC1 1196 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 HENMT1Q5T8I9 393 aaKnown RBP15.25■□□□□ 0.03
RAB5C-205ENST00000550013 NCBP2-AS2Q69YL0 99 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 LYSMD3Q7Z3D4 306 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 KDELC2Q7Z4H8 507 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 CPNE8Q86YQ8 564 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 C9orf43Q8TAL5 461 aaPredicted RBP15.25■□□□□ 0.03
RAB5C-205ENST00000550013 FAM71BQ8TC56 605 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 STN1Q9H668 368 aaKnown RBP15.25■□□□□ 0.03
RAB5C-205ENST00000550013 PCDH9Q9HC56 1237 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 ARFGAP3Q9NP61 516 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 FBXO8Q9NRD0 319 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 RCOR3Q9P2K3 495 aaPredicted RBP15.25■□□□□ 0.03
RAB5C-205ENST00000550013 IP6K2Q9UHH9 426 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 DNPEPQ9ULA0 475 aa15.25■□□□□ 0.03
RAB5C-205ENST00000550013 UTP20O75691 2785 aaKnown RBP15.24■□□□□ 0.03
RAB5C-205ENST00000550013 F3P13726 295 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 GJC1P36383 396 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 SPINT3P49223 89 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 FOXK1P85037 733 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 ABHD18Q0P651 414 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 DPYSL3Q14195 570 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 PAFAH1B3Q15102 231 aaKnown RBP15.24■□□□□ 0.03
RAB5C-205ENST00000550013 TDRD12Q587J7 1177 aaKnown RBP15.24■□□□□ 0.03
RAB5C-205ENST00000550013 CCDC122Q5T0U0 273 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 CCDC183Q5T5S1 534 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 ZNF648Q5T619 568 aaPredicted RBP15.24■□□□□ 0.03
RAB5C-205ENST00000550013 HGSNATQ68CP4 663 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 SLC9B2Q86UD5 537 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 STARD8Q92502 1023 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 SH3KBP1Q96B97 665 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 LYSMD1Q96S90 227 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 ZPBPQ9BS86 351 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 HERPUD2Q9BSE4 406 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 NUP85Q9BW27 656 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 PRDM8Q9NQV8 689 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 SIDT1Q9NXL6 827 aaKnown RBP15.24■□□□□ 0.03
RAB5C-205ENST00000550013 ANKMY1Q9P2S6 941 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 CPNE7Q9UBL6 633 aa15.24■□□□□ 0.03
RAB5C-205ENST00000550013 TMEM184BQ9Y519 407 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms