RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 HTRA2O43464 458 aaPredicted RBP12.14□□□□□ -0.47
DDX54-206ENST00000549271 LDLRP01130 860 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 AMPD1P23109 780 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 IL4RP24394 825 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 GRNP28799 593 aaKnown RBP12.14□□□□□ -0.47
DDX54-206ENST00000549271 CSF2RBP32927 897 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 GPR3P46089 330 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 RENBPP51606 427 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 SLC25A11Q02978 314 aaKnown RBP12.14□□□□□ -0.47
DDX54-206ENST00000549271 TBX2Q13207 712 aaPredicted RBP12.14□□□□□ -0.47
DDX54-206ENST00000549271 TRIM14Q14142 442 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 SLC18A3Q16572 532 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 TMCO4Q5TGY1 634 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 PNCKQ6P2M8 343 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 FAM129CQ86XR2 697 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 CBARPQ8N350 705 aaPredicted RBP12.14□□□□□ -0.47
DDX54-206ENST00000549271 LZTR1Q8N653 840 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 TEKT4Q8WW24 435 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 HSPH1Q92598 858 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 COQ10AQ96MF6 247 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 CINPQ9BW66 212 aaPredicted RBP12.14□□□□□ -0.47
DDX54-206ENST00000549271 ZWILCHQ9H900 591 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 CYP4F12Q9HCS2 524 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 MRPL40Q9NQ50 206 aaKnown RBP12.14□□□□□ -0.47
DDX54-206ENST00000549271 SPATS2LQ9NUQ6 558 aaKnown RBP12.14□□□□□ -0.47
DDX54-206ENST00000549271 TMEM9Q9P0T7 183 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 TLK1Q9UKI8 766 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 MRPS18BQ9Y676 258 aaKnown RBP12.14□□□□□ -0.47
DDX54-206ENST00000549271 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.13□□□□□ -0.47
DDX54-206ENST00000549271 H3BRJ5 948 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 MYO1FO00160 1098 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 MFAP3LO75121 409 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 SOCS5O75159 536 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 RFPL1O75677 317 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 SORBS2O94875 1100 aaKnown RBP12.13□□□□□ -0.47
DDX54-206ENST00000549271 TEAD1P28347 426 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 HSPA9P38646 679 aaKnown RBP12.13□□□□□ -0.47
DDX54-206ENST00000549271 STAT5AP42229 794 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 ARSEP51690 589 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 EIF2S3LQ2VIR3 472 aaKnown RBP12.13□□□□□ -0.47
DDX54-206ENST00000549271 KRTAP21-3Q3LHN1 58 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 ATP13A4Q4VNC1 1196 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 NKAIN2Q5VXU1 208 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 NRSN1Q8IZ57 195 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 FAM71BQ8TC56 605 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 TCTN2Q96GX1 697 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 NSMCE3Q96MG7 304 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 CSPG4P5Q96PW8 444 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 DPYSL5Q9BPU6 564 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 LGR4Q9BXB1 951 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 TEX101Q9BY14 249 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 TRIT1Q9H3H1 467 aaKnown RBP12.13□□□□□ -0.47
DDX54-206ENST00000549271 WDR26Q9H7D7 661 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 SP110Q9HB58 689 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 PCDH18Q9HCL0 1135 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 ABHD10Q9NUJ1 306 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.13□□□□□ -0.47
DDX54-206ENST00000549271 PDP2Q9P2J9 529 aa12.13□□□□□ -0.47
DDX54-206ENST00000549271 ERRFI1Q9UJM3 462 aaPredicted RBP12.13□□□□□ -0.47
DDX54-206ENST00000549271 IGHV1OR21-1A0A087WYE8 117 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 PRSS38A1L453 326 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 TCP11X1B4DZS4 312 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 DFFAO00273 331 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 STK17BO94768 372 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 PROSCO94903 275 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 DLGAP3O95886 979 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 PEX11BO96011 259 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 FGF1P05230 155 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 FURINP09958 794 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 H2AFZP0C0S5 128 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 MYCLP1P12525 358 aaPredicted RBP12.12□□□□□ -0.47
DDX54-206ENST00000549271 CCNB1P14635 433 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 F8A1P23610 371 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 MPSTP25325 297 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 ARL4AP40617 200 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 SCNN1BP51168 640 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 PMS2P54278 862 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 MC2RQ01718 297 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 MMRN1Q13201 1228 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 MRPL49Q13405 166 aaKnown RBP12.12□□□□□ -0.47
DDX54-206ENST00000549271 LBRQ14739 615 aaKnown RBP12.12□□□□□ -0.47
DDX54-206ENST00000549271 RALGPS1Q5JS13 557 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 TMEM71Q6P5X7 295 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 SARM1Q6SZW1 724 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 CEACAM20Q6UY09 585 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 H2AFVQ71UI9 128 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 KDELC2Q7Z4H8 507 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 NRROSQ86YC3 692 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 PELI3Q8N2H9 469 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 ZDHHC1Q8WTX9 485 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 CTRCQ99895 268 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 ZPBPQ9BS86 351 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 NHEJ1Q9H9Q4 299 aaPredicted RBP12.12□□□□□ -0.47
DDX54-206ENST00000549271 TRNAU1APQ9NX07 287 aaKnown RBP12.12□□□□□ -0.47
DDX54-206ENST00000549271 CTTNBP2NLQ9P2B4 639 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 UVRAGQ9P2Y5 699 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 B4GALT6Q9UBX8 382 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 POLHQ9Y253 713 aa12.12□□□□□ -0.47
DDX54-206ENST00000549271 PSMD11O00231 422 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 HEXIM1O94992 359 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms