RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 SLC25A23Q9BV35 468 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 RIMS3Q9UJD0 308 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 MRASO14807 208 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 TRIM24O15164 1050 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 STX7O15400 261 aaKnown RBP18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 GPR39O43194 453 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 MAP3K13O43283 966 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 FKTNO75072 461 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 PRAMEF12O95522 483 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 ZCCHC18P0CG32 403 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 TTPAP49638 278 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 ACADVLP49748 655 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 ADGRE1Q14246 886 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 SPOUT1Q5T280 376 aaKnown RBP18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 LAYNQ6UX15 382 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 TMCO2Q7Z6W1 182 aaPredicted RBP18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 WFDC5Q8TCV5 224 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 ADAMTS19Q8TE59 1207 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 ASB9Q96DX5 294 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 PCDHAC1Q9H158 963 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 COPS7BQ9H9Q2 264 aaPredicted RBP18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 SEMA4BQ9NPR2 832 aaPredicted RBP18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 FCF1Q9Y324 198 aaKnown RBP18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 OR51B4Q9Y5P0 310 aa18.42■□□□□ 0.54
PRPF40B-208ENST00000548436 CAPN8A6NHC0 703 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 NCF1BA6NI72 391 aaPredicted RBP18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 NCF1CA8MVU1 366 aaPredicted RBP18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 BTN3A1O00481 513 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 GREM1O60565 184 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 PYGLP06737 847 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 NCF1P14598 390 aaPredicted RBP18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 VCLP18206 1134 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 AGTR2P50052 363 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 RALGDSQ12967 914 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 LCP2Q13094 533 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 TRIM25Q14258 630 aaKnown RBP18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 VEPH1Q14D04 833 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 ATXN7L2Q5T6C5 722 aaPredicted RBP18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 C8orf82Q6P1X6 216 aaPredicted RBP18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 ZNF783Q6ZMS7 281 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 DDIASQ8IXT1 998 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 NKAPQ8N5F7 415 aaKnown RBP18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 EEF1AKMT1Q8WVE0 214 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 DLG3Q92796 817 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 SUCOQ9UBS9 1254 aaKnown RBP18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 SUFUQ9UMX1 484 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 BTRCQ9Y297 605 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 DTNAQ9Y4J8 743 aa18.41■□□□□ 0.54
PRPF40B-208ENST00000548436 PRSS51A0A1B0GVH4 220 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 PRORSD1PA6NEY8 169 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 PRRG1O14668 218 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 FZD6O60353 706 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 VPS26AO75436 327 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 RPS17P08708 135 aaKnown RBP18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 LINC00032P0C843 101 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 NME5P56597 212 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 STX1BP61266 288 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 ECT2LQ008S8 904 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 KIF19Q2TAC6 998 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 INO80DQ53TQ3 878 aaPredicted RBP18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 ANKS6Q68DC2 871 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 SPATA24Q86W54 205 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 CD200R1Q8TD46 325 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 AUTS2Q8WXX7 1259 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 EID2BQ96D98 161 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 VWCEQ96DN2 955 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 ZNF334Q9HCZ1 680 aaPredicted RBP18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 VPS51Q9UID3 782 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 VPS9D1Q9Y2B5 631 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 PCDHB9Q9Y5E1 797 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 H7C0S8 307 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 KLK8O60259 260 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 PRDX3P30048 256 aaKnown RBP18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 CSKP41240 450 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 RHOAP61586 193 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 MED21Q13503 144 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 RNF220Q5VTB9 566 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 RETREG3Q86VR2 466 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 ICA1LQ8NDH6 482 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 BHMTQ93088 406 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 ALG14Q96F25 216 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 DCUN1D1Q96GG9 259 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 LRGUKQ96M69 825 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 GCNAQ96QF7 691 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 PKP2Q99959 881 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 SLC39A3Q9BRY0 314 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 SPAG4Q9NPE6 437 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 CD300AQ9UGN4 299 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 POLG2Q9UHN1 485 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 TRMT6Q9UJA5 497 aaKnown RBP18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 DENND4CQ5VZ89 1909 aa18.4■□□□□ 0.54
PRPF40B-208ENST00000548436 A0A0J9YYE9 177 aa18.39■□□□□ 0.53
PRPF40B-208ENST00000548436 SYCE1LA8MT33 242 aa18.39■□□□□ 0.53
PRPF40B-208ENST00000548436 K7ERQ8 282 aa18.39■□□□□ 0.53
PRPF40B-208ENST00000548436 BMP1P13497 986 aa18.39■□□□□ 0.53
PRPF40B-208ENST00000548436 PPP3CCP48454 512 aa18.39■□□□□ 0.53
PRPF40B-208ENST00000548436 CLCN4P51793 760 aa18.39■□□□□ 0.53
PRPF40B-208ENST00000548436 HK3P52790 923 aa18.39■□□□□ 0.53
PRPF40B-208ENST00000548436 FBXL19Q6PCT2 694 aa18.39■□□□□ 0.53
PRPF40B-208ENST00000548436 SLC39A11Q8N1S5 342 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms