RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 MZF1P28698 734 aaPredicted RBP16■□□□□ 0.15
SCNN1A-221ENST00000543768 MC4RP32245 332 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 ATP6V0D1P61421 351 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 RAD51Q06609 339 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 DYNC1I2Q13409 638 aaKnown RBP16■□□□□ 0.15
SCNN1A-221ENST00000543768 ADGRE1Q14246 886 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 GRAMD1BQ3KR37 738 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 C8orf82Q6P1X6 216 aaPredicted RBP16■□□□□ 0.15
SCNN1A-221ENST00000543768 NCEH1Q6PIU2 408 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 FBXO39Q8N4B4 442 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 TTC30BQ8N4P2 665 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 B4GALNT2Q8NHY0 566 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 FUBP1Q96AE4 644 aaKnown RBP16■□□□□ 0.15
SCNN1A-221ENST00000543768 ASB9Q96DX5 294 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 ZFRQ96KR1 1074 aaKnown RBP16■□□□□ 0.15
SCNN1A-221ENST00000543768 ADGRE3Q9BY15 652 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 HIPK3Q9H422 1215 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 BPIFA1Q9NP55 256 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 PLXNA4Q9HCM2 1894 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 SUPT3HB4E1H0 165 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 PIP5K1BO14986 540 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 SUPT3HO75486 399 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 ZCCHC18P0CG32 403 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 EEF1DP29692 281 aaKnown RBP16■□□□□ 0.15
SCNN1A-221ENST00000543768 CLCQ05315 142 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 TRIM25Q14258 630 aaKnown RBP16■□□□□ 0.15
SCNN1A-221ENST00000543768 FBXO48Q5FWF7 155 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 TMEM150AQ86TG1 271 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 SMPD4Q9NXE4 827 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 LHX3Q9UBR4 397 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 SUCOQ9UBS9 1254 aaKnown RBP16■□□□□ 0.15
SCNN1A-221ENST00000543768 ANKRD12Q6UB98 2062 aa16■□□□□ 0.15
SCNN1A-221ENST00000543768 COL4A6Q14031 1691 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 CAPN8A6NHC0 703 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 MRASO14807 208 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 SCAMP3O14828 347 aaKnown RBP15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 TSPAN12O95859 305 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 PKMP14618 531 aaKnown RBP15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 CTSL3PQ5NE16 218 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 FOXB2Q5VYV0 432 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 TPGS2Q68CL5 300 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 TMEM126BQ8IUX1 230 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 EFHBQ8N7U6 833 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 COPS7BQ9H9Q2 264 aaPredicted RBP15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 GIMAP2Q9UG22 337 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 CD300AQ9UGN4 299 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 DTNAQ9Y4J8 743 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 PRORSD1PA6NEY8 169 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 H7C0S8 307 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 NIPSNAP2O75323 286 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 SOD2P04179 222 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 RPS17P08708 135 aaKnown RBP15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 CD9P21926 228 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 TTPAP49638 278 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 LCP2Q13094 533 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 MED21Q13503 144 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 GRB7Q14451 532 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 TAF12Q16514 161 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 GEN1Q17RS7 908 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 HACD2Q6Y1H2 254 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 ZNF783Q6ZMS7 281 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 TICAM1Q8IUC6 712 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 NKAPQ8N5F7 415 aaKnown RBP15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 BTBD9Q96Q07 612 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 SLC22A12Q96S37 553 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 PCDHAC1Q9H158 963 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 VPS9D1Q9Y2B5 631 aa15.99■□□□□ 0.15
SCNN1A-221ENST00000543768 NPEPPSL1A6NEC2 478 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 STX7O15400 261 aaKnown RBP15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 KLK8O60259 260 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 FZD6O60353 706 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 TBL1XO60907 577 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 CAPNS1P04632 268 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 PYGLP06737 847 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 INO80DQ53TQ3 878 aaPredicted RBP15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 ANKS6Q68DC2 871 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 DNAJB7Q7Z6W7 309 aaPredicted RBP15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 SPATA24Q86W54 205 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 HERC6Q8IVU3 1022 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 CARNMT1Q8N4J0 409 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 SIDT2Q8NBJ9 832 aaKnown RBP15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 ICA1LQ8NDH6 482 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 DCUN1D1Q96GG9 259 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 LRGUKQ96M69 825 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 PKP2Q99959 881 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 FEM1AQ9BSK4 669 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 C1QTNF3Q9BXJ4 246 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 SPAG4Q9NPE6 437 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 SEMA4BQ9NPR2 832 aaPredicted RBP15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 MRPL40Q9NQ50 206 aaKnown RBP15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 TMEM181Q9P2C4 612 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 OR51B4Q9Y5P0 310 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 H0Y626 953 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 GREM1O60565 184 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 VPS26AO75436 327 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 PRAMEF12O95522 483 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 PIM1P11309 404 aaPredicted RBP15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 CLCN4P51793 760 aa15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 RPL26P61254 145 aaKnown RBP15.98■□□□□ 0.15
SCNN1A-221ENST00000543768 STX1BP61266 288 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms