RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 UGT1A3P35503 534 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 UGT1A5P35504 534 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 PPARGP37231 505 aaPredicted RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 CTSKP43235 329 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 MAGEA6P43360 314 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 RPL21P46778 160 aaKnown RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 GNPDA1P46926 289 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 BLKP51451 505 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 ZNF140P52738 457 aaPredicted RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 PLTPP55058 493 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 KIAA1024LP59773 190 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 SRP54P61011 504 aaKnown RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 HNRNPKP61978 463 aaKnown RBP eCLIP6.27□□□□□ -1.41
LTBR-212ENST00000543542 CAV1Q03135 178 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 FZD2Q14332 565 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 HLTFQ14527 1009 aaKnown RBP eCLIP6.27□□□□□ -1.41
LTBR-212ENST00000543542 SUZ12Q15022 739 aaKnown RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 HIF1AQ16665 826 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 INAVAQ3KP66 663 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 ATP13A5Q4VNC0 1218 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 GLE1Q53GS7 698 aaKnown RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 FASTKD1Q53R41 847 aaKnown RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 HP1BP3Q5SSJ5 553 aaPredicted RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 LDLRAP1Q5SW96 308 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 TEX35Q5T0J7 233 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 HENMT1Q5T8I9 393 aaKnown RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 PDPK2PQ6A1A2 396 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 CES3Q6UWW8 571 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 ADAMTSL4Q6UY14 1074 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 TRIM74Q86UV6 250 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 CAND1Q86VP6 1230 aaKnown RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 NLRP8Q86W28 1048 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 CCDC25Q86WR0 208 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 SPATS2Q86XZ4 545 aaKnown RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 GALNT13Q8IUC8 556 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 SLC22A18ASQ8N1D0 253 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 PELI3Q8N2H9 469 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 CBARPQ8N350 705 aaPredicted RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 MMGT1Q8N4V1 131 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 LMX1AQ8TE12 382 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 SETD7Q8WTS6 366 aaKnown RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 IFT81Q8WYA0 676 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 GLYATL1Q969I3 302 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 HDAC10Q969S8 669 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 TSACCQ96A04 125 aaPredicted RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 ZNF669Q96BR6 464 aaPredicted RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 ULK4Q96C45 1275 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 STAMBPL1Q96FJ0 436 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 CFAP36Q96G28 342 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 DCUN1D1Q96GG9 259 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 CDKN2AIPNLQ96HQ2 116 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 TBATAQ96M53 351 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 ELF4Q99607 663 aaPredicted RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 LGR4Q9BXB1 951 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 TEX101Q9BY14 249 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 ZCCHC2Q9C0B9 1178 aaKnown RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 OR2AG1Q9H205 316 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 FAM96AQ9H5X1 160 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 ERVMER34-1Q9H9K5 563 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 CARS2Q9HA77 564 aaKnown RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 UGT1A7Q9HAW7 530 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 UGT1A10Q9HAW8 530 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 UGT1A8Q9HAW9 530 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 EPB41L5Q9HCM4 733 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 CYP4F12Q9HCS2 524 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 IL26Q9NPH9 171 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 CHRAC1Q9NRG0 131 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 TM7SF3Q9NS93 570 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 WHRNQ9P202 907 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 APOBEC3BQ9UH17 382 aaKnown RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 ZNHIT2Q9UHR6 403 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 SOX13Q9UN79 622 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 TMEM98Q9Y2Y6 226 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 ZNF106Q9H2Y7 1883 aaKnown RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 LAMA1P25391 3075 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 A0A1B0GTQ1 180 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 ESYT3A0FGR9 886 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 PRSS38A1L453 326 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 CCDC162PA2VCL2 907 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 TMEM202A6NGA9 273 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 MROH6A6NGR9 719 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 OR51F1A6NGY5 319 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 C10orf142B7Z368 130 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 CFAP99D6REC4 459 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 PFDN6O15212 129 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 FFAR2O15552 330 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 GDF9O60383 454 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 MTX2O75431 263 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 CDK14O94921 469 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 GOT2P00505 430 aaKnown RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 CSF2P04141 144 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 ANXA6P08133 673 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 HOXC4P09017 264 aaPredicted RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 RHOXF2BP0C7M4 288 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 ALPPL2P10696 532 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 PGAM1P18669 254 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 KCNA4P22459 653 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 NMBRP28336 390 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 PMLP29590 882 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 TRIM23P36406 574 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms