RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 SBK3P0C264 359 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 RALBP11234 206 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 FGF3P11487 239 aaPredicted RBP10.96□□□□□ -0.66
SCG3-202ENST00000542355 CD46P15529 392 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 TIMP2P16035 220 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 CA5AP35218 305 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 SPAM1P38567 509 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 NFATC2Q13469 925 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 CHRNA6Q15825 494 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 C9orf64Q5T6V5 341 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 SERPINA13PQ6UXR4 307 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 GPR26Q8NDV2 337 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 RAB3IL1Q8TBN0 382 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 ZNF398Q8TD17 642 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.96□□□□□ -0.66
SCG3-202ENST00000542355 ERLEC1Q96DZ1 483 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 LRIG1Q96JA1 1093 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 UBXN10Q96LJ8 280 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 NPHS2Q9NP85 383 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 SARDHQ9UL12 918 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 EYSQ5T1H1 3165 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.95□□□□□ -0.66
SCG3-202ENST00000542355 KPNA3O00505 521 aaPredicted RBP10.95□□□□□ -0.66
SCG3-202ENST00000542355 MAP3K7O43318 606 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 S100BP04271 92 aaPredicted RBP10.95□□□□□ -0.66
SCG3-202ENST00000542355 APOA4P06727 396 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 LTA4HP09960 611 aaKnown RBP10.95□□□□□ -0.66
SCG3-202ENST00000542355 MYL2P10916 166 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 PKMP14618 531 aaKnown RBP10.95□□□□□ -0.66
SCG3-202ENST00000542355 ITGALP20701 1170 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 XPAP23025 273 aaPredicted RBP10.95□□□□□ -0.66
SCG3-202ENST00000542355 PTGER3P43115 390 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 SOX9P48436 509 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 ARHGEF7Q14155 803 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 ITIH4Q14624 930 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 DBN1Q16643 649 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 HNRNPA1L2Q32P51 320 aaKnown RBP10.95□□□□□ -0.66
SCG3-202ENST00000542355 ITPRIPL2Q3MIP1 535 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 AGAP9Q5VTM2 703 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 C6orf89Q6UWU4 347 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 CERS6Q6ZMG9 384 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 SNX20Q7Z614 316 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 C11orf96Q7Z7L8 435 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 SERPINA9Q86WD7 417 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 CBARPQ8N350 705 aaPredicted RBP10.95□□□□□ -0.66
SCG3-202ENST00000542355 KDM1BQ8NB78 822 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 SMRP1Q8NCR6 262 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 UCMAQ8WVF2 138 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 SGF29Q96ES7 293 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 C19orf43Q9BQ61 176 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 TMEM245Q9H330 911 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 FBRSL1Q9HCM7 1045 aaKnown RBP10.95□□□□□ -0.66
SCG3-202ENST00000542355 THAP1Q9NVV9 213 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 TAS2R13Q9NYV9 303 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 MED16Q9Y2X0 877 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 ARL2BPQ9Y2Y0 163 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 TNRC18O15417 2968 aaPredicted RBP10.95□□□□□ -0.66
SCG3-202ENST00000542355 ANKRD36A6QL64 1941 aa10.95□□□□□ -0.66
SCG3-202ENST00000542355 EDDM13A0A1B0GTR0 161 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 C2orf72A6NCS6 295 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 C16orf96A6NNT2 1141 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 TARM1B6A8C7 271 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 H3BQ06 376 aaPredicted RBP10.94□□□□□ -0.66
SCG3-202ENST00000542355 ARNTLO00327 626 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 ITM2AO43736 263 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 TRIM13O60858 407 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 WISP3O95389 354 aaPredicted RBP10.94□□□□□ -0.66
SCG3-202ENST00000542355 C1SP09871 688 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 TROVE2P10155 538 aaKnown RBP eCLIP10.94□□□□□ -0.66
SCG3-202ENST00000542355 CHRM3P20309 590 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 IL12RB1P42701 662 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 SLC1A6P48664 564 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 OCRLQ01968 901 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 BIRC2Q13490 618 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 KLC3Q6P597 504 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 C1orf216Q8TAB5 229 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 NAT14Q8WUY8 206 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 ACOX2Q99424 681 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 MRPL46Q9H2W6 279 aaKnown RBP10.94□□□□□ -0.66
SCG3-202ENST00000542355 KLHL14Q9P2G3 628 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 GALPQ9UBC7 116 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 CD84Q9UIB8 345 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 CRLS1Q9UJA2 301 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 MID2Q9UJV3 735 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 IQCF5A8MTL0 148 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 UPK3BL1B0FP48 263 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 UPK3BL2E5RIL1 263 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 NIPSNAP2O75323 286 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 SNNO75324 88 aaPredicted RBP10.94□□□□□ -0.66
SCG3-202ENST00000542355 LYPLA1O75608 230 aaPredicted RBP10.94□□□□□ -0.66
SCG3-202ENST00000542355 PRNPP04156 253 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 SERPINE1P05121 402 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 KITP10721 976 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 CYP2A6P11509 494 aaPredicted RBP10.94□□□□□ -0.66
SCG3-202ENST00000542355 GRK2P25098 689 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 PPARGP37231 505 aaPredicted RBP10.94□□□□□ -0.66
SCG3-202ENST00000542355 EIF2DP41214 584 aaKnown RBP10.94□□□□□ -0.66
SCG3-202ENST00000542355 GRIA2P42262 883 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 SPINT3P49223 89 aa10.94□□□□□ -0.66
SCG3-202ENST00000542355 SUOXP51687 545 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms