RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 SRFP11831 508 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 GNSP15586 552 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 TMEM11P17152 192 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 AOC1P19801 751 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 KELP23276 732 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 GUCY1A2P33402 732 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 RORAP35398 523 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 HMGCLP35914 325 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 EIF2S3P41091 472 aaKnown RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 EIF2DP41214 584 aaKnown RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 HTR2BP41595 481 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CD86P42081 329 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 IL12RB1P42701 662 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 PCP4P48539 62 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 PSMD8P48556 350 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 FNTBP49356 437 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 HK2P52789 917 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 GBX2P52951 348 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CDH6P55285 790 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 GFRA1P56159 465 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 RBP5P82980 135 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CNTN2Q02246 1040 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 TNK1Q13470 666 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 KCNC3Q14003 757 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 TMEM132BQ14DG7 1078 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 AANATQ16613 207 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 WSCD2Q2TBF2 565 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 EIF2S3LQ2VIR3 472 aaKnown RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 HSD17B12Q53GQ0 312 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 FSCBQ5H9T9 825 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 SAPCD1Q5SSQ6 148 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 ODR4Q5SWX8 454 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CCNYL2Q5T2Q4 361 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 ATF7IP2Q5U623 682 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 YOD1Q5VVQ6 348 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 PYHIN1Q6K0P9 492 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 MZT2BQ6NZ67 158 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 BRAT1Q6PJG6 821 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 RNF207Q6ZRF8 634 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 ZNF765Q7L2R6 523 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 NEK8Q86SG6 692 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 NOXA1Q86UR1 476 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 SLC51AQ86UW1 340 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CARM1Q86X55 608 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CDKL3Q8IVW4 592 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CARFQ8N187 725 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 PCDH20Q8N6Y1 951 aaKnown RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 TDRD5Q8NAT2 981 aaKnown RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 C11orf65Q8NCR3 313 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 ZNF540Q8NDQ6 660 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 TRPV1Q8NER1 839 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 OR6F1Q8NGZ6 308 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 RNASE11Q8TAA1 199 aaKnown RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 ZFAND1Q8TCF1 268 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 HEXDCQ8WVB3 486 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 POMGNT1Q8WZA1 660 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 FIG4Q92562 907 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 AKAP1Q92667 903 aaKnown RBP eCLIP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 TANKQ92844 425 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 COPS5Q92905 334 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 TCEAL3Q969E4 200 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 TOP1MTQ969P6 601 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CPNE4Q96A23 557 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 C18orf25Q96B23 403 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 LRRC39Q96DD0 335 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 SGTBQ96EQ0 304 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 DUS3LQ96G46 650 aaKnown RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 BTN2A3PQ96KV6 586 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 ZNF597Q96LX8 424 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CNBD2Q96M20 576 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 ZDHHC15Q96MV8 337 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 GDF15Q99988 308 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 LGR4Q9BXB1 951 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 NPLQ9BXD5 320 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 HDAC8Q9BY41 377 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 SLC22A4Q9H015 551 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 MTFR1LQ9H019 292 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 WWP1Q9H0M0 922 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 OR51V1Q9H2C8 321 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 PIGUQ9H490 435 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 LDAHQ9H6V9 325 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 POLD4Q9HCU8 107 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 C19orf12Q9NSK7 152 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 SACM1LQ9NTJ5 587 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 ECHDC1Q9NTX5 307 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 DDX28Q9NUL7 540 aaKnown RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CMTM6Q9NX76 183 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 MTMR4Q9NYA4 1195 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 ASH2LQ9UBL3 628 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 EPHA6Q9UF33 1036 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 PCYOX1Q9UHG3 505 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 ZNF229Q9UJW7 825 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 VAV3Q9UKW4 847 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 ITGA11Q9UKX5 1188 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 AGO1Q9UL18 857 aaKnown RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 MKLN1Q9UL63 735 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CDH9Q9ULB4 789 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 PCDHGB4Q9UN71 923 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 TMX2Q9Y320 296 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 MAGED1Q9Y5V3 778 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms