RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 COG7P83436 770 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 GOLGA8FQ08AF8 430 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 GOLGA8DPQ0D2H9 430 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 GRSF1Q12849 480 aaKnown RBP eCLIP6.52□□□□□ -1.37
TTR-203ENST00000541025 EIF4EBP2Q13542 120 aaPredicted RBP6.52□□□□□ -1.37
TTR-203ENST00000541025 DGKKQ5KSL6 1271 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 EMC10Q5UCC4 262 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 OTUD1Q5VV17 481 aaPredicted RBP6.52□□□□□ -1.37
TTR-203ENST00000541025 NAA35Q5VZE5 725 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 OR6B2Q6IFH4 312 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 TRNP1Q6NT89 227 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 TOGARAM2Q6ZUX3 1019 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 RHOT2Q8IXI1 618 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 FAM217AQ8IXS0 508 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 RPLP0P6Q8NHW5 317 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 JADE3Q92613 823 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 ATOH1Q92858 354 aaPredicted RBP6.52□□□□□ -1.37
TTR-203ENST00000541025 SPAG5Q96R06 1193 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 PCDHB18PQ96TA0 734 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 BBS2Q9BXC9 721 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 TTYH3Q9C0H2 523 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 REXO4Q9GZR2 422 aaKnown RBP6.52□□□□□ -1.37
TTR-203ENST00000541025 POPDC2Q9HBU9 364 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 OLA1Q9NTK5 396 aaKnown RBP6.52□□□□□ -1.37
TTR-203ENST00000541025 MOCS1Q9NZB8 636 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 XPO7Q9UIA9 1087 aaKnown RBP6.52□□□□□ -1.37
TTR-203ENST00000541025 LSM7Q9UK45 103 aaKnown RBP6.52□□□□□ -1.37
TTR-203ENST00000541025 CLEC4EQ9ULY5 219 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 HBS1LQ9Y450 684 aaKnown RBP6.52□□□□□ -1.37
TTR-203ENST00000541025 R4GN57 208 aa6.52□□□□□ -1.37
TTR-203ENST00000541025 CFAP54Q96N23 3096 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 ADAMTS9Q9P2N4 1935 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 GOLGA6CA6NDK9 693 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 GOLGA6BA6NDN3 693 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 LRRC53A6NM62 1247 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 MARCH11A6NNE9 402 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 I6L893 689 aaPredicted RBP6.51□□□□□ -1.37
TTR-203ENST00000541025 IRAK2O43187 625 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 TSPAN3O60637 253 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 KAT7O95251 611 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 SERPINC1P01008 464 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 PENKP01210 267 aaPredicted RBP6.51□□□□□ -1.37
TTR-203ENST00000541025 CISD3P0C7P0 127 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 GOLGA6DP0CG33 693 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 UNGP13051 313 aaPredicted RBP6.51□□□□□ -1.37
TTR-203ENST00000541025 ALOX15P16050 662 aaPredicted RBP6.51□□□□□ -1.37
TTR-203ENST00000541025 DRD1P21728 446 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 ECHS1P30084 290 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 SLC6A4P31645 630 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 PBX1P40424 430 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 EIF2DP41214 584 aaKnown RBP6.51□□□□□ -1.37
TTR-203ENST00000541025 STAT1P42224 750 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 MAGEA9P43362 315 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 GABRB2P47870 512 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 SEC24CP53992 1094 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 YWHAZP63104 245 aaKnown RBP6.51□□□□□ -1.37
TTR-203ENST00000541025 CDR2Q01850 454 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 CSTF1Q05048 431 aaKnown RBP6.51□□□□□ -1.37
TTR-203ENST00000541025 GAD2Q05329 585 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 PTP4A2Q12974 167 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 MALLQ13021 153 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 SPDYE7PQ495Y7 208 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 DCAF6Q58WW2 860 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 FAM133BQ5BKY9 247 aaKnown RBP6.51□□□□□ -1.37
TTR-203ENST00000541025 NADSYN1Q6IA69 706 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 RFWD3Q6PCD5 774 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 Q6ZVL8 140 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 BEND5Q7L4P6 421 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 SLC26A9Q7LBE3 791 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 IRF2BP2Q7Z5L9 587 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 PHLDB2Q86SQ0 1253 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 DNAAF5Q86Y56 855 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 DEFB106AQ8N104 65 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 CPXM2Q8N436 756 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 SPEM1Q8N4L4 309 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 PPM1NQ8N819 430 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 TMEM35BQ8NCS4 154 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 SLC30A5Q8TAD4 765 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 SLC9A6Q92581 669 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 GOLGA1Q92805 767 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 NELL1Q92832 810 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 SLC39A13Q96H72 371 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 PRICKLE1Q96MT3 831 aaPredicted RBP6.51□□□□□ -1.37
TTR-203ENST00000541025 PNKPQ96T60 521 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 SMAD5Q99717 465 aaKnown RBP6.51□□□□□ -1.37
TTR-203ENST00000541025 SYT11Q9BT88 431 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 PDCL3Q9H2J4 239 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 DNAJC17Q9NVM6 304 aaKnown RBP6.51□□□□□ -1.37
TTR-203ENST00000541025 GOLGA6AQ9NYA3 693 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 IFNKQ9P0W0 207 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 PTGFRNQ9P2B2 879 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 ZNF180Q9UJW8 692 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 STOML2Q9UJZ1 356 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 ANKRD6Q9Y2G4 727 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 DAAM1Q9Y4D1 1078 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 CEP83Q9Y592 693 aa6.51□□□□□ -1.37
TTR-203ENST00000541025 ANKRD36A6QL64 1941 aa6.5□□□□□ -1.37
TTR-203ENST00000541025 ZNF292O60281 2723 aa6.5□□□□□ -1.37
TTR-203ENST00000541025 SYNJ2BP-COX16A0A087WUM0 186 aa6.5□□□□□ -1.37
TTR-203ENST00000541025 KLHL33A6NCF5 533 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms