RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 A8MT66 165 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 PLK4O00444 970 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 TSPAN12O95859 305 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 APOA4P06727 396 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 SRPRAP08240 638 aaKnown RBP12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 GJA4P35212 333 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 LTBRP36941 435 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 SCTRP47872 440 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 AQP5P55064 265 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 VWA5B1Q5TIE3 1220 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 GRAMD4Q6IC98 578 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 HSD11B1LQ7Z5J1 315 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 MTDHQ86UE4 582 aaKnown RBP12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 LCA5Q86VQ0 697 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 PLPP6Q8IY26 295 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 KIAA1958Q8N8K9 716 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 RDH11Q8TC12 318 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 AGR3Q8TD06 166 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 SKA1Q96BD8 255 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 TMEM237Q96Q45 408 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 ACOX2Q99424 681 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 POMKQ9H5K3 350 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 FBRSL1Q9HCM7 1045 aaKnown RBP12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 OBP2AQ9NY56 170 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 HEY2Q9UBP5 337 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 CD84Q9UIB8 345 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 CORO1CQ9ULV4 474 aaPredicted RBP12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 SLC12A4Q9UP95 1085 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 TRIM33Q9UPN9 1127 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 ITM2BQ9Y287 266 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 OAS3Q9Y6K5 1087 aaKnown RBP12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 SLC30A1Q9Y6M5 507 aa12.19□□□□□ -0.46
AP003559.1-201ENST00000540906 GLYATL1P3A0A0U1RQE8 302 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 TSPAN11A1L157 253 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 LRRC14BA6NHZ5 514 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 SPINT1O43278 529 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 ITGB6P18564 788 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 GRK2P25098 689 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 SERPINB3P29508 390 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 SPAM1P38567 509 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 SOX9P48436 509 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 TTPAP49638 278 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 LIG3P49916 1009 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 RALGDSQ12967 914 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 NFATC2Q13469 925 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 TUBB3Q13509 450 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 PDGFRLQ15198 375 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 FAM83EQ2M2I3 478 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 LRIT3Q3SXY7 679 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 AGAP9Q5VTM2 703 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 USP45Q70EL2 814 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 PARS2Q7L3T8 475 aaKnown RBP12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 STK40Q8N2I9 435 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 CLDN19Q8N6F1 224 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 MAPK15Q8TD08 544 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 ZNF398Q8TD17 642 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 CD200R1Q8TD46 325 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 EXT2Q93063 718 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 ARRDC3Q96B67 414 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 ZNF576Q9H609 170 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 TNFRSF12AQ9NP84 129 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 PCDH12Q9NPG4 1184 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 DEC1Q9P2X7 70 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 IL36AQ9UHA7 158 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 UNC80Q8N2C7 3258 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 CDC7O00311 574 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 ASLP04424 464 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 LAMP2P13473 410 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 ATP5F1P24539 256 aaPredicted RBP12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 RECQLP46063 649 aaPredicted RBP12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 VASPP50552 380 aaPredicted RBP12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 CLCN7P51798 805 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 NCALDP61601 193 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 B4GALNT1Q00973 533 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 RAD51Q06609 339 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 BNIP1Q12981 228 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 PDAP1Q13442 181 aaKnown RBP12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 RUNX3Q13761 415 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 ZNF234Q14588 700 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 ACAP2Q15057 778 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 ARL13AQ5H913 290 aaPredicted RBP12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 C9orf64Q5T6V5 341 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 EP400NLQ6ZTU2 488 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 SNX20Q7Z614 316 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 CPNE9Q8IYJ1 553 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 PPP2R3CQ969Q6 453 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 TTYH1Q9H313 450 aaPredicted RBP12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 POPDC3Q9HBV1 291 aa12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 TSR3Q9UJK0 312 aaKnown RBP12.18□□□□□ -0.46
AP003559.1-201ENST00000540906 LRRK1Q38SD2 2015 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 PLXNA2O75051 1894 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 NPEPPSL1A6NEC2 478 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 TMEM114B3SHH9 223 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 UBXN8O00124 270 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 ARNTLO00327 626 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 ATP5BP06576 529 aaKnown RBP12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 T-ENOLP0DO92 83 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 MTHFD2P13995 350 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 GM2AP17900 193 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 ACRV1P26436 265 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms