RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 GDI1P31150 447 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 SPAM1P38567 509 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 PCLAFQ15004 111 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 CHI3L2Q15782 390 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 FAM83EQ2M2I3 478 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 HNRNPA1L2Q32P51 320 aaKnown RBP16.8■□□□□ 0.28
COPS3-212ENST00000539941 ITPRIPL2Q3MIP1 535 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 FNDC3BQ53EP0 1204 aaKnown RBP16.8■□□□□ 0.28
COPS3-212ENST00000539941 ZNF805Q5CZA5 627 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 LYPLAL1Q5VWZ2 237 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 CWF19L1Q69YN2 538 aaKnown RBP16.8■□□□□ 0.28
COPS3-212ENST00000539941 PSAPL1Q6NUJ1 521 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 ZNF549Q6P9A3 640 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 NUDT18Q6ZVK8 323 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 SNX20Q7Z614 316 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 PIANPQ8IYJ0 282 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 SMRP1Q8NCR6 262 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 KCTD4Q8WVF5 259 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 FGF14Q92915 247 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 MECRQ9BV79 373 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 GPAMQ9HCL2 828 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 SLCO1B3Q9NPD5 702 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 ZNF358Q9NW07 568 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 RUVBL2Q9Y230 463 aaKnown RBP16.8■□□□□ 0.28
COPS3-212ENST00000539941 USP15Q9Y4E8 981 aaPredicted RBP16.8■□□□□ 0.28
COPS3-212ENST00000539941 A6NHS1 94 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 UPK3BL1B0FP48 263 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 UPK3BL2E5RIL1 263 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 SRP72O76094 671 aaKnown RBP16.79■□□□□ 0.28
COPS3-212ENST00000539941 PRNPP04156 253 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 BPIP17213 487 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 ALDH3A1P30838 453 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 PTGER3P43115 390 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 IRX4P78413 519 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 MESP2Q0VG99 397 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 SKIV2LQ15477 1246 aaKnown RBP16.79■□□□□ 0.28
COPS3-212ENST00000539941 GPR33Q49SQ1 333 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 ARSIQ5FYB1 569 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 AGAP9Q5VTM2 703 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 LRRC66Q68CR7 880 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 OTOAQ7RTW8 1153 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 GBP7Q8N8V2 638 aaPredicted RBP16.79■□□□□ 0.28
COPS3-212ENST00000539941 SPDYE1Q8NFV5 336 aaPredicted RBP16.79■□□□□ 0.28
COPS3-212ENST00000539941 UBXN10Q96LJ8 280 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 C7orf26Q96N11 449 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 GPR78Q96P69 363 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 GTSE1Q9NYZ3 720 aa16.79■□□□□ 0.28
COPS3-212ENST00000539941 TRBV5-4A0A0C4DH59 114 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 GLYATL1P3A0A0U1RQE8 302 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 UBA6A0AVT1 1052 aaPredicted RBP16.78■□□□□ 0.28
COPS3-212ENST00000539941 TBC1D3BA6NDS4 549 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 H2AFYO75367 372 aaKnown RBP16.78■□□□□ 0.28
COPS3-212ENST00000539941 WFS1O76024 890 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 TGDSO95455 350 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 PRAMEF1O95521 474 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 LTA4HP09960 611 aaKnown RBP16.78■□□□□ 0.28
COPS3-212ENST00000539941 PRSS56P0CW18 603 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 BMP1P13497 986 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 GRK2P25098 689 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 GMPRP36959 345 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 GRIA2P42262 883 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 PRKAA2P54646 552 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 CDKN2DP55273 166 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 ZNF460Q14592 562 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 LRRC8EQ6NSJ5 796 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 CGB2Q6NT52 195 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 KLC3Q6P597 504 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 TSPAN33Q86UF1 283 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 TMIEQ8NEW7 156 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 ST13P5Q8NFI4 369 aaPredicted RBP16.78■□□□□ 0.28
COPS3-212ENST00000539941 PPP1R14CQ8TAE6 165 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 PLEKHG4BQ96PX9 1271 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 MRPL57Q9BQC6 102 aaKnown RBP16.78■□□□□ 0.28
COPS3-212ENST00000539941 TMEM245Q9H330 911 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 IL26Q9NPH9 171 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 IGSF5Q9NSI5 407 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 B4GALT6Q9UBX8 382 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 A0A0U1RQS6 177 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 G3V2L1 256 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 ARNTLO00327 626 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 GAPDHSO14556 408 aaPredicted RBP16.78■□□□□ 0.28
COPS3-212ENST00000539941 SNNO75324 88 aaPredicted RBP16.78■□□□□ 0.28
COPS3-212ENST00000539941 KAT7O95251 611 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 ESR1P03372 595 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 SERPINE1P05121 402 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 CTSLP07711 333 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 TROVE2P10155 538 aaKnown RBP eCLIP16.78■□□□□ 0.28
COPS3-212ENST00000539941 FGF3P11487 239 aaPredicted RBP16.78■□□□□ 0.28
COPS3-212ENST00000539941 PKMP14618 531 aaKnown RBP16.78■□□□□ 0.28
COPS3-212ENST00000539941 SP100P23497 879 aaPredicted RBP16.78■□□□□ 0.28
COPS3-212ENST00000539941 VIPR1P32241 457 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 BST1Q10588 318 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 STX3Q13277 289 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 NFATC2Q13469 925 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 ARHGEF7Q14155 803 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 ELAVL3Q14576 367 aaKnown RBP16.78■□□□□ 0.28
COPS3-212ENST00000539941 ZYG11AQ6WRX3 759 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 TAS2R42Q7RTR8 314 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 PNPLA1Q8N8W4 532 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 OR8D1Q8WZ84 308 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms