RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ZBTB41Q5SVQ8 909 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 HEATR6Q6AI08 1181 aaKnown RBP7.65□□□□□ -1.18
CCDC60-204ENST00000539847 C8orf82Q6P1X6 216 aaPredicted RBP7.65□□□□□ -1.18
CCDC60-204ENST00000539847 ZBTB49Q6ZSB9 765 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 CCDC80Q76M96 950 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 DENND4AQ7Z401 1863 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 SLITRK4Q8IW52 837 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 ZBTB8OSQ8IWT0 167 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 KLHDC8BQ8IXV7 354 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 MPP5Q8N3R9 675 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 GALNT4Q8N4A0 578 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 DCLK2Q8N568 766 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 EMC1Q8N766 993 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 SCAIQ8N9R8 606 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 CXorf38Q8TB03 319 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 TSPEARQ8WU66 669 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 STYXQ8WUJ0 223 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 ROPN1LQ96C74 230 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 ISOC1Q96CN7 298 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 RCN3Q96D15 328 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 CCDC126Q96EE4 140 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 HSPBAP1Q96EW2 488 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 CERS2Q96G23 380 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 PLEKHA8Q96JA3 519 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 TSNARE1Q96NA8 513 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 OR52B2Q96RD2 323 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 HOPXQ9BPY8 73 aaPredicted RBP7.65□□□□□ -1.18
CCDC60-204ENST00000539847 BCL7BQ9BQE9 202 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 TMEM79Q9BSE2 394 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 C9orf16Q9BUW7 83 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 VN1R3Q9BXE9 311 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 EIF2AQ9BY44 585 aaKnown RBP7.65□□□□□ -1.18
CCDC60-204ENST00000539847 CEP44Q9C0F1 390 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 LIN7BQ9HAP6 207 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 ZFYVE1Q9HBF4 777 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.65□□□□□ -1.18
CCDC60-204ENST00000539847 CCM2LQ9NUG4 571 aaPredicted RBP7.65□□□□□ -1.18
CCDC60-204ENST00000539847 TMEM45AQ9NWC5 275 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 DUS2Q9NX74 493 aaKnown RBP7.65□□□□□ -1.18
CCDC60-204ENST00000539847 DLL3Q9NYJ7 618 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.65□□□□□ -1.18
CCDC60-204ENST00000539847 TMEM181Q9P2C4 612 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 PIN4Q9Y237 131 aaKnown RBP7.65□□□□□ -1.18
CCDC60-204ENST00000539847 PCDHGC4Q9Y5F7 938 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 PCDHGA7Q9Y5G6 932 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.65□□□□□ -1.18
CCDC60-204ENST00000539847 DMXL1Q9Y485 3027 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 A0A087WZ62 844 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 A0A096LPK6 155 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 HEATR9A2RTY3 570 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 FUOMA2VDF0 154 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 BBIP1A8MTZ0 92 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 TARM1B6A8C7 271 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 ANHXE9PGG2 379 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 H0YAE9 185 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 PSMD12O00232 456 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-204ENST00000539847 ACKR2O00590 384 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 KPNA4O00629 521 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-204ENST00000539847 NCAM2O15394 837 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 SULT1C4O75897 302 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 GLUD1P00367 558 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 C2P06681 752 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 POU2F2P09086 479 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 CELA3AP09093 270 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 FAM157BP0CG42 384 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 UMPSP11172 480 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 EPHA3P29320 983 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 AXLP30530 894 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 CA8P35219 290 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 MLH1P40692 756 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 ENTPD1P49961 510 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 KPNA2P52292 529 aaKnown RBP7.64□□□□□ -1.19
CCDC60-204ENST00000539847 ZNF135P52742 658 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-204ENST00000539847 NDST2P52849 883 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 PTSQ03393 145 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 PRKCQQ04759 706 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 TNP2Q05952 138 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 SLC10A2Q12908 348 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-204ENST00000539847 BNIP2Q12982 314 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 PTK2BQ14289 1009 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 C16orf72Q14CZ0 275 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 UGP2Q16851 508 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 MTERF2Q49AM1 385 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 COQ5Q5HYK3 327 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 VWA5B1Q5TIE3 1220 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 IL23RQ5VWK5 629 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 OR6B2Q6IFH4 312 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 MPZL3Q6UWV2 235 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 NAPRTQ6XQN6 538 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 AGMOQ6ZNB7 445 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 PDZD4Q76G19 769 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-204ENST00000539847 STRADAQ7RTN6 431 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 CATSPER4Q7RTX7 472 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 DGLUCYQ7Z3D6 616 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 PIWIL4Q7Z3Z4 852 aaKnown RBP7.64□□□□□ -1.19
CCDC60-204ENST00000539847 SPRED1Q7Z699 444 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 CCDC117Q8IWD4 279 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-204ENST00000539847 SIX6OS1Q8N1H7 587 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 PELI3Q8N2H9 469 aa7.64□□□□□ -1.19
CCDC60-204ENST00000539847 TMEM151AQ8N4L1 468 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms